Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1876 ATGTGGACGACGAAGAGGAAGTACTCTTTGAGTTCTTGTAATAATCTCATAACTCCATCATCAACAACAAAACCCTCTTCTTGTTCTTATGATGATTCTTCATGGGAAGAACAAGCTTTCGCCGAAGACGCTTCGGGGCATCTTGGTGGATGCATATGGCCGCCGAGATCATACACTTGCAGCTTCTGTAGAAGAGAGTTCAGATCAGCTCAAGCTCTTGGAGGCCACATGAATGTTCATAGAAGAGATAGAGCCAGACTCAAACAGCCTTCAAGCCCACAAAACAACAATGAACTTCATCATCAAATTCCAAATACTTCTTCTTCTTCCTTTATGGGTTTCATATACCCCTACAATAATAATAATTTTTCTCCTACTAACCCTAATTCTGTTCTTGTTGCTTCACCTTCTTCTCATATCGCTTTAGCTCCATCTTCAAACATTGCTTATAATTCTTCTTCTATTGTTCCCCCACCACAAGGACATGGGGTTATGGCTTCTAATAATTCTTCTCTCTATTCTTCTTCGAACTGGTCAAACTTGGCTGAAGCTGAAGAAGCTGAGAAGATCACAGAGGTATTGGATTGTGAGTGCGATCATGAGGATAATGGAAAATCTGATTTGGCTTTTAGTTTAAATTTGGTGTTGTGTAGAGGTATCGAGACAAAGGAGGAAGATATAATTAGTTGCAAGAAGAGAAGAACTTGTGAAACTTCATCGATTCTTCCTCTCTTCCCAAATTCAAATTTTTCAACTGAATTGATTAGCCCTAGCCCCAAAGAAGAGCTAGATCTGGAGCTAAGGCTGGGTCAAAGCAAGCACAAGGTATAG 831 0.4019 MWTTKRKYSLSSCNNLITPSSTTKPSSCSYDDSSWEEQAFAEDASGHLGGCIWPPRSYTCSFCRREFRSAQALGGHMNVHRRDRARLKQPSSPQNNNELHHQIPNTSSSSFMGFIYPYNNNNFSPTNPNSVLVASPSSHIALAPSSNIAYNSSSIVPPPQGHGVMASNNSSLYSSSNWSNLAEAEEAEKITEVLDCECDHEDNGKSDLAFSLNLVLCRGIETKEEDIISCKKRRTCETSSILPLFPNSNFSTELISPSPKEELDLELRLGQSKHKV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1876 276 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Acco07g1876 276 Pfam C2H2-type zinc finger 58 82 - -
Acco07g1876 276 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 85 IPR013087 -
Acco07g1876 276 SMART c2h2final6 58 80 IPR013087 -
Acco07g1876 276 MobiDBLite consensus disorder prediction 81 101 - -
Acco07g1876 276 Gene3D Classic Zinc Finger 54 111 - -
Acco07g1876 276 SUPERFAMILY beta-beta-alpha zinc fingers 55 84 IPR036236 -
Acco07g1876 276 PANTHER OS07G0101800 PROTEIN 30 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1876 Acco-ChrAcco07 36104120 36104950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1876 32 89 C2H2 Transcription Factor Family AT2G37740 81.034 2.53e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco07g1876 zf-C2H2_6 4.9e-06 CL0361