Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1875 ATGGAGTTTAGCCTTAAAAACAAAGACAAATCTGAGAGAATAAGGTGGGGTTATTCCTCAGAGGAAGCAAGACAAGTAAGATCCTATACTTGTGATTTTTGTCAGAAAGGGTTTTCAAACGCACAAGCTCTTGGTGGTCACATGAACATTCATAGAAGAGATCGAGCCAGGCTGAGGCAACAATATTCTCTTGACACAAACCCTAATAATGAGCTTCATGATCAGAACCCTGATGATGATATTAATCATAAAAAGCCATCAATTTTTCCAGAGGCAAAGGTCAATACTGGTATTTCCTCTGAAATTTCTTCTCAGCTGCCTATTTTTTTCGGCGTAGAAGAGAAGATGGAGTTGGACCTTGAACTTCGGTTGGGTCCTGAGCCAGTAAAGCAGACACCACCTATTCTGAGGCGATTCTTTTGA 423 0.4066 MEFSLKNKDKSERIRWGYSSEEARQVRSYTCDFCQKGFSNAQALGGHMNIHRRDRARLRQQYSLDTNPNNELHDQNPDDDINHKKPSIFPEAKVNTGISSEISSQLPIFFGVEEKMELDLELRLGPEPVKQTPPILRRFF 140
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1875 140 Gene3D Classic Zinc Finger 6 86 - -
Acco07g1875 140 PANTHER OS07G0101800 PROTEIN 11 84 - -
Acco07g1875 140 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Acco07g1875 140 MobiDBLite consensus disorder prediction 60 87 - -
Acco07g1875 140 SMART c2h2final6 29 51 IPR013087 -
Acco07g1875 140 MobiDBLite consensus disorder prediction 72 87 - -
Acco07g1875 140 FunFam Zinc finger protein-like 26 52 - -
Acco07g1875 140 SUPERFAMILY beta-beta-alpha zinc fingers 27 56 IPR036236 -
Acco07g1875 140 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco07g1875 Acco-ChrAcco07 36093065 36093487 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1875 25 131 C2H2 Transcription Factor Family AT3G09290 41.727 1.84e-20 80.5
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco07g1875 None None None