Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1819 ATGGCTGAGGTGAAATCGGAGGAGTGTTGCCTGGAGAATAAACAAACTATTGCTGCTTCTAGCTCCTCTATATCTGAAAGCAGTGGCTGTGCTCTACCCAAGTCCCCTGGGATATGTAGCCCAACATCCACATCACCCGCTCATCGGAGAACTTCTGGCCCTATAAGGCGTGCGAAAGGTGGTTGGACAGCAGAAGAGGATGAGACACTAAGGAATTCTGTTGCAATTTTCAAGGGAAAGAATTGGAAGAAAATAGCTGAGTCTTTCCCTGATAGATCAGAAGTGCAATGTCTCCACAGATGGCAAAAAGTTCTTAACCCAGAACTTGTTAAAGGGCCTTGGACTCAGGAGGAGGATGATAAAATTGTTGAACTAGTGTCAAAATATGGGCCTACAAAATGGTCATTAATAGCCAAGTCCCTGCCTGGTCGGATAGGGAAACAGTGCCGAGAGCGATGGCACAACCATCTTAATCCTGACATAAAGAAGGATGCCTGGACTTCGGCAGAGGAATTAGCCATCATGAAGGTTCATAGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTGCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCATTGAAGAAGAAGTTGGATTTTTATTTAACTACTGGACATCTTCCACCAGTTTCAAAGAATAGTCCAAAAGTTGCTGTCAAAGACAAAGTAATATTCTGTGCAACAGAAACAATTCTAGGTAGTTCAAATAAAGTATTAGATGCAGCTACTGAAACATCATCAGAAACTACAGAGATTAATAAGCAAGAAGATAGTGATAAGAATCACTCAAGGCTTTTAGCAGCAGCAAGAGATGTTCGTGATTCTTCAAATGTTCTTGCAAATGAATCTGCTGATTCTGACTGTATAGAATGCAAGCCCAAATCCTCCACTTTAGATTTAAGCTGCAGCAAATCAGTACCAATGTCAAGAGATAATTTCGGAATGAATGGTGAACAAACGCATGAGAAATCTGGATTCAATGGCAACCTAGCAATCGAGCATTGTGTAAATAATAGCAGGTCGTTCACAAAACATTTTTCTCGGGAAGGTCCGACTCGTGGTTCTTTATGTTATGAGCCACTGCAGATGGATAATTTGGTTCCTTTAGATTCTCTTTATTCAAATATCTTTTGCCTCCAACATGACTACAGCTCTACTCCCATGATGTCTCCTGCTGGTTTCTTCACTCCACCTTGTGTGAAGGATCATGAATTTTTCAAACAAACTCCTGAGTCGATATTGAAAATGGCTGCCGAGACTTACCCAAATATCCCTGCCATATTGAGGAAGAGAAGGACTGGAGTCCAGACCCAAGACACTCCCAGTAAAGTTGTGAAAGTTGATGGAGAATCACATGCTTCTGTTGGCCAGCAGAGAAATAAGAATGATACTGATTCTGAAATTGTGAGGTTCTCTGACAGTCCAGCAAGCCATGGCCATGGCAATGCCCTTCCCGATAATAAAATTTTCAATGCATCTCCTCCCTACCGGTTAAGATCCAAGCGAACAGGAGTTGTCAAGTCTGTGGAGAAACAACTTGAGCTTGCATTTGACCAAGAAAAGCACGACGAAATCATGAGGAAAATGGGAAAGTCTTCAACATAG 1647 0.4202 MAEVKSEECCLENKQTIAASSSSISESSGCALPKSPGICSPTSTSPAHRRTSGPIRRAKGGWTAEEDETLRNSVAIFKGKNWKKIAESFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTSAEELAIMKVHSIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLTTGHLPPVSKNSPKVAVKDKVIFCATETILGSSNKVLDAATETSSETTEINKQEDSDKNHSRLLAAARDVRDSSNVLANESADSDCIECKPKSSTLDLSCSKSVPMSRDNFGMNGEQTHEKSGFNGNLAIEHCVNNSRSFTKHFSREGPTRGSLCYEPLQMDNLVPLDSLYSNIFCLQHDYSSTPMMSPAGFFTPPCVKDHEFFKQTPESILKMAAETYPNIPAILRKRRTGVQTQDTPSKVVKVDGESHASVGQQRNKNDTDSEIVRFSDSPASHGHGNALPDNKIFNASPPYRLRSKRTGVVKSVEKQLELAFDQEKHDEIMRKMGKSST 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1819 548 Gene3D - 111 162 - -
Acco07g1819 548 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Acco07g1819 548 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Acco07g1819 548 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Acco07g1819 548 SMART sant 58 107 IPR001005 -
Acco07g1819 548 SMART sant 110 159 IPR001005 -
Acco07g1819 548 SMART sant 162 210 IPR001005 -
Acco07g1819 548 MobiDBLite consensus disorder prediction 39 63 - -
Acco07g1819 548 CDD SANT 113 157 IPR001005 -
Acco07g1819 548 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Acco07g1819 548 PANTHER MYB PROTEIN-RELATED 59 144 - -
Acco07g1819 548 FunFam Transcriptional activator Myb isoform A 111 163 - -
Acco07g1819 548 MobiDBLite consensus disorder prediction 253 275 - -
Acco07g1819 548 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Acco07g1819 548 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Acco07g1819 548 Pfam Myb-like DNA-binding domain 163 206 IPR001005 -
Acco07g1819 548 Pfam Myb-like DNA-binding domain 111 157 IPR001005 -
Acco07g1819 548 CDD SANT 62 105 IPR001005 -
Acco07g1819 548 Gene3D - 164 234 - -
Acco07g1819 548 MobiDBLite consensus disorder prediction 446 504 - -
Acco07g1819 548 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Acco07g1819 548 Gene3D - 58 110 - -
Acco07g1819 548 FunFam Transcription factor MYB3R-2 164 229 - -
Acco07g1819 548 CDD SANT 165 208 IPR001005 -
Acco07g1819 548 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Acco07g1819 548 FunFam Transcriptional activator Myb isoform A 58 110 - -
Acco07g1819 548 SUPERFAMILY Homeodomain-like 60 115 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1819 Acco-ChrAcco07 35080362 35083899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1819 49 536 MYB Transcription Factor Family AT5G02320 48.503 2.03e-132 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco07g1819 Myb_DNA-binding 7.4e-13 CL0123