Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1807 ATGTCAAGAGCAGGGTCATCAAGATGGAGTCCAACCCCAGAACAACTTATGATTTTGGAGCAACTGTATAGAAGTGGGATTAGAACTCCAAGTGCTTCACAAATCCAACACATAACAACTCATCTTTGTTTTTATGGTAGGATTGAAGGAAAGAATGTGTTTTATTGGTTTCAGAATCATAAGGCTAGAGATAGACAGAAGCTCAGGAGGAAACTGAACAAGCAGCTTCAACTACAACAACAGCAGTATCAGATGCTTGTTCATCAATGCCAAGTGATTAATCATCAGGATAATAAGACTCATCATCATCACTGGTCTTTTGGTGGCTTTGATTCTTCTCCTGGTTCTTCATCAGCCCAACAAGTTCCTTTTTATAACCCACCTATCTTGCTTTCTCAGGGAGAGACGTCATCAGAAACATGGAAGACTGCGCAGGGGCAACAAAGCGAGGAGATGATGGATAAAACAAAGACGATGACGTCATCACTTGATTACAACAACAATGGTATGATGAGTTGTTGGAGTGTTGCGGATGTTAATGAAGAATCCTCGTATTGTAGCACAAGCCGACCCCTCAAGACTCTTGACCTCTTTCCGACCACATCCTCCAAACTCGAAGAAGGCCACTTTAACCCAACGGTCTGA 645 0.4233 MSRAGSSRWSPTPEQLMILEQLYRSGIRTPSASQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQQYQMLVHQCQVINHQDNKTHHHHWSFGGFDSSPGSSSAQQVPFYNPPILLSQGETSSETWKTAQGQQSEEMMDKTKTMTSSLDYNNNGMMSCWSVADVNEESSYCSTSRPLKTLDLFPTTSSKLEEGHFNPTV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1807 214 Coils Coil 69 89 - -
Acco07g1807 214 FunFam WUSCHEL-related homeobox 4 6 73 - -
Acco07g1807 214 CDD homeodomain 8 67 IPR001356 GO:0003677
Acco07g1807 214 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Acco07g1807 214 SUPERFAMILY Homeodomain-like 4 69 IPR009057 -
Acco07g1807 214 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Acco07g1807 214 Gene3D - 1 67 - -
Acco07g1807 214 SMART HOX_1 4 71 IPR001356 GO:0003677
Acco07g1807 214 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 206 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1807 Acco-ChrAcco07 34960172 34961229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1807 1 74 Wox Gene Family AT2G28610 81.081 7.71e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco07g1807 Homeodomain 9.4e-18 CL0123