Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1803 ATGGCCACGATGCAGCCCCGGAAATCGTTCACACTGAACTGGGCCGGTCTTGGAGACGACGACGAAGACGACGACCTCTTCTTCGAAACGCGCGAACGTATGTCCTCCGCCGCTCCGATCGACCTGGAAGCTTCTTCCTCGGATGACGACGGAGACTTTGAAGAGAGCCGCATGTCGTTCAGCTCCAACATCTCTTTCAATGATCAATCCGAGAGAGTCAAGCCTTTTCCGGTGTCTTTCAATGCATTGAGCTCCGACTACGACATGTGGATGACGGCTCCAGGATCAATTACAGAGCGAAGAAAACGATTACTTCTCGGAATGGGACTGAATGAGAACAGAGATTTCTTACGAATGACAAGCATGGCTCTGGATCACGCAATTTCGAAAAAATTCGAAAACGACCAAATCGATTGTTCACCTTCAACGCCAACAACAAGCACAACTAAATCTCCTCCTTATCCTCCTCGTTCATCTTCTCCTCCTCATTCATCTTCTTCTCCTGTAAGTTTAAAAAAAGAGGAAAACCAACCTAGAAGATCGAGAAAGCCGTCGATAATCCCCTTTGTTCTCGGTCGCTCGCGATCTGAAGGTGACATCACTTTCTTCTCAATGCCAAGATGTAGAAAAGAGGAATTCATCGGAAAAATCTCCAAGCAACGCCTCACAAGAACCTCGTCGGATATGGCACTCTGCCACGGCGGGGGCGGCGGCGGTCCGCACAAAGATGAATCCCAAGTCGCCGCCATTGCGAAAGGTAAGGAAAGGCGGCCACCGCAACGGCACGGCTCGAAGATGACGTCAGCGAAGTCTAATTGGGGATTGGGGGCTTTCTTCTTGATCAAGAATTTGGACACAGGAAAAGAATTCATCGTGAACGAATCTAGAGAAGACGGGATGTGGAACAGACTAAGCGATCTGCAAACAGGGAAGAAACTAACGATGGAGGAATTCGAACGCCACCTCGGGTTTTCTCCGTTGGTGAAAGAGCTAATGAGTCGTGAGAAAGTGACCAGAAGTACAAGCGACAGTCTCGGATACAGTCTAGGATACGAGAGAAAACTCACAACACACCATTCATATTTCTCAAAGAGCCTAAGGAGAAGCAAGAGAACAGGGGCAGCTCTGTTGAAGAACATAAAGGGAGTTGCTTCTGGTTTCATCGGAGAAAGAGAAAGAGACGAAACACAACTGTCGAATTCTGAACAGAAGCCCGCGACGACGATGACGAAGAAAGAACAGTGGGTGAGAGTTAGACAGAGTGGGAAATCCACAAAGGAGCTCTCAGCTCTGCATCAATGTCAGGAATTTCAAGCTCATGAAGGATGTATATGGAAGATCAAGTTCAGTAATGACGGTCGTTACATGGCGAGTTCAGGGGAAGACACGGTGATTCATGTTTGGGAAGTTCAAGAATTCGAAGTGATATCTATGAAGACAGAGGAAGGGAGTCCTACTCCGATTCATCCATCGTTACTCGGATCGCCGGAACGAAATGGAAAGAAAGGGAAACATGGGAGCAATAGAGGAAGTAGTTTTACGGTTCCGGACTATGTTCATACCCCTGAAACTGTCTTCTCTTTCTCTGAGAAACCTCATTGCTCTTTCCATGGCCATTCCGACGACGTTTTGGACCTGTCTTGGTCAAGATCTCAGTTACTTCTATCTTCATCAATGGATAAAACAGTGAGATTATGGGACATGGAATGCCGGGCCTGCTTGAAGGTGTTCGCCCACAGTGACTATGTAACGTGCGTACAGTTCAATCCAATCGACGAAGACTATTTCATTAGTGGATGTTTGGATGCTAAAGTAAGGATATGGAATATACCTGGACGCTTTGTGGTGGATTGGATTGATGCCCATGAGATGGTCACTGCTATTTCTTACACTCCTGACGCTCAAGCAGCTTTTGTTGGTACTCATAAAGGAGGTTGTCGCCCGTATAGCTTAGAAGATGGCAAAATAAGTCAAATGGGCACAATTGAGCTTCGGAGAAAGAAGAAATCTCATTTAAGAAAGGTGACTGGTTTTCAGTTTTCTCCAACTAATCCATCAGAAGTGCTTGTTACTTCAGCTGATTCCAGGATCAGAATTGTGGAAGATTCCAGAGTTGTTCATAAGTTTGTAGGTTTTCGAAACGCAAACAGCCAAATTTCAGGATCATTTAGCCCAGATGGAAGATATGTGATAAGTGCAAGTGAAGACTCACATGTATATGTGTGGAAAAATGAAGGCCATGCAAAATCCAGAAACATGATTCTGACCCAATCCCATGAGCAATTTCAATGCAGAGACGTGTCGGTTGCGATTCCTTGGTCTCGAACCATTAAAGGCGACCCTCCGGTAGGATTGGCCGTCCACCACCACTCCAAGAGACAGTCGAAACATTCTTCTTCTTCATGTGGATCTCCTCTTATTCATAATAACAACAATAATAAGGGAACAATTTTGCCTCCTCTTATTCCCAAAAAGAAAAACAACCATCACCATAATCATCATAACCTTGGCTCTGATACAACCTCTCCTTCCGCGACCTCTCGTACCATGTCTGGGATTAATGGGGCGATTTCGTCCGCTCATGGTGGTAGTAAGAGCAGGTGGTCCCCATTTTCTAGGAATAAGAGTGGCAACAATAATGGTGATCACCACCATGTCATGGCGGAAGAGGATGACCCGGCAGCCATAGCTCGCACTAATTCTGGGTTTGGGGACTCGTTTTCTTCTTCTGATTCTGGTTCTGGTTCCAATAGGTATGGCGATTCGCCTTTGATTTCTGCTTCTGCTAGGTCATCATCATCTTCTGGATCTTGGTCAATGCAGTATGATAATGGTCATGCCAATTCAAGCTCTCATGCTTCAGCTTGGGGTTTGGTGATTGTAACAGCTGGGTATGGAGGTGAAATCAGGTGTTATCAAAATTTTGGGTTGCCTAGAAAAGTATGA 2946 0.4589 MATMQPRKSFTLNWAGLGDDDEDDDLFFETRERMSSAAPIDLEASSSDDDGDFEESRMSFSSNISFNDQSERVKPFPVSFNALSSDYDMWMTAPGSITERRKRLLLGMGLNENRDFLRMTSMALDHAISKKFENDQIDCSPSTPTTSTTKSPPYPPRSSSPPHSSSSPVSLKKEENQPRRSRKPSIIPFVLGRSRSEGDITFFSMPRCRKEEFIGKISKQRLTRTSSDMALCHGGGGGGPHKDESQVAAIAKGKERRPPQRHGSKMTSAKSNWGLGAFFLIKNLDTGKEFIVNESREDGMWNRLSDLQTGKKLTMEEFERHLGFSPLVKELMSREKVTRSTSDSLGYSLGYERKLTTHHSYFSKSLRRSKRTGAALLKNIKGVASGFIGERERDETQLSNSEQKPATTMTKKEQWVRVRQSGKSTKELSALHQCQEFQAHEGCIWKIKFSNDGRYMASSGEDTVIHVWEVQEFEVISMKTEEGSPTPIHPSLLGSPERNGKKGKHGSNRGSSFTVPDYVHTPETVFSFSEKPHCSFHGHSDDVLDLSWSRSQLLLSSSMDKTVRLWDMECRACLKVFAHSDYVTCVQFNPIDEDYFISGCLDAKVRIWNIPGRFVVDWIDAHEMVTAISYTPDAQAAFVGTHKGGCRPYSLEDGKISQMGTIELRRKKKSHLRKVTGFQFSPTNPSEVLVTSADSRIRIVEDSRVVHKFVGFRNANSQISGSFSPDGRYVISASEDSHVYVWKNEGHAKSRNMILTQSHEQFQCRDVSVAIPWSRTIKGDPPVGLAVHHHSKRQSKHSSSSCGSPLIHNNNNNKGTILPPLIPKKKNNHHHNHHNLGSDTTSPSATSRTMSGINGAISSAHGGSKSRWSPFSRNKSGNNNGDHHHVMAEEDDPAAIARTNSGFGDSFSSSDSGSGSNRYGDSPLISASARSSSSSGSWSMQYDNGHANSSSHASAWGLVIVTAGYGGEIRCYQNFGLPRKV 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1803 981 MobiDBLite consensus disorder prediction 1 20 - -
Acco07g1803 981 MobiDBLite consensus disorder prediction 901 939 - -
Acco07g1803 981 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 536 569 - -
Acco07g1803 981 Gene3D - 421 771 IPR015943 GO:0005515
Acco07g1803 981 MobiDBLite consensus disorder prediction 135 190 - -
Acco07g1803 981 ProSitePatterns Trp-Asp (WD) repeats signature. 554 568 IPR019775 -
Acco07g1803 981 MobiDBLite consensus disorder prediction 391 413 - -
Acco07g1803 981 SUPERFAMILY WD40 repeat-like 432 746 IPR036322 GO:0005515
Acco07g1803 981 MobiDBLite consensus disorder prediction 878 892 - -
Acco07g1803 981 SMART WD40_4 661 701 IPR001680 GO:0005515
Acco07g1803 981 SMART WD40_4 529 567 IPR001680 GO:0005515
Acco07g1803 981 SMART WD40_4 430 469 IPR001680 GO:0005515
Acco07g1803 981 SMART WD40_4 570 609 IPR001680 GO:0005515
Acco07g1803 981 SMART WD40_4 702 743 IPR001680 GO:0005515
Acco07g1803 981 SMART WD40_4 935 973 IPR001680 GO:0005515
Acco07g1803 981 Pfam WD domain, G-beta repeat 572 609 IPR001680 GO:0005515
Acco07g1803 981 Pfam WD domain, G-beta repeat 722 743 IPR001680 GO:0005515
Acco07g1803 981 Pfam WD domain, G-beta repeat 534 567 IPR001680 GO:0005515
Acco07g1803 981 Pfam WD domain, G-beta repeat 435 468 IPR001680 GO:0005515
Acco07g1803 981 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 437 471 - -
Acco07g1803 981 MobiDBLite consensus disorder prediction 837 877 - -
Acco07g1803 981 PRINTS G protein beta WD-40 repeat signature 456 470 IPR020472 -
Acco07g1803 981 PRINTS G protein beta WD-40 repeat signature 554 568 IPR020472 -
Acco07g1803 981 PRINTS G protein beta WD-40 repeat signature 596 610 IPR020472 -
Acco07g1803 981 ProSiteProfiles Trp-Asp (WD) repeats profile. 722 743 IPR001680 GO:0005515
Acco07g1803 981 ProSiteProfiles Trp-Asp (WD) repeats profile. 536 576 IPR001680 GO:0005515
Acco07g1803 981 PANTHER WD REPEAT DOMAIN 44 20 978 IPR040324 -
Acco07g1803 981 ProSiteProfiles Trp-Asp (WD) repeats profile. 576 610 IPR001680 GO:0005515
Acco07g1803 981 MobiDBLite consensus disorder prediction 148 162 - -
Acco07g1803 981 ProSiteProfiles Trp-Asp (WD) repeats profile. 437 478 IPR001680 GO:0005515
Acco07g1803 981 ProSitePatterns Trp-Asp (WD) repeats signature. 456 470 IPR019775 -
Acco07g1803 981 MobiDBLite consensus disorder prediction 797 817 - -
Acco07g1803 981 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 576 610 - -
Acco07g1803 981 MobiDBLite consensus disorder prediction 480 513 - -
Acco07g1803 981 MobiDBLite consensus disorder prediction 786 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1803 Acco-ChrAcco07 34895674 34899323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1803 535 740 U-box Gene Family AT2G33340 28.241 5.28e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0039 09 395895 400295 Acco07g1803 07 34895674 34899323 CCT