Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1797 ATGGTTTTTACTTCAATTCCTCCTTATCTTGATCCAGCCAACTGGCAACAACAGCAAAGTAATCACCACCACACGGGTGCTCTCGCCGGTGGGGGTGCTTTGAGCTCTCAGCATCATCAGCATCAGCAGCAGCAGCAGCAACAGCTTCTTTCTCCGCCACACCCTCTTCCGCCTGCGCTGCCTCAACCGCAGCCTCATGGAGGAGGAGGGACGAGTTCGATCAGGCCAGGTTCGATGGCTGATCGAGCCCGGATGGCGAACATACCCATGCCGGAGGCTTCTCTGAAATGTCCAAGGTGTGAATCTGCCAACACCAAGTTTTGCTACTTCAACAACTACAGTCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGTCGGAGGTACTGGACCCGTGGCGGCGCCCTGAGGAATGTGCCTGTTGGAGGAGGATGCCGGAGGAACAAGAGATCAAGCAAAGGAAGCAGCTCCAAGTCACCGGCGAGCTCAGATCGTCAAGCCGGAAGCACTAGTTCAACCAACTCCGTTTCTTCTAACAGTAATTCCGCCGGCGACCTAATAGGCCTCACTCCTCACACGCCACCGCTGAGATTTATGTCTCCCTTACTCGCCGATTTCACCGCTGCTGGTGGGGACATGGGGTTAACCTACGGCGTAAATTATAACGCAATTTCAGCACCAATGGGAGGAATAGTCAGCGACTTAAATTTCCAAATAGGAAGTGCTTTTGGCGGAGGCGGAGGAGGAGGAAGTGGCAGTGGCGGGACCACCACAGCTGTGGCCGGAAGTAGCGGCGGGTCTATCTTATTCGCTCCAGGTTTAGAACAATGGCGTGTGCCACAAACACAGCAATTTCCTTTCTTGGCTGCTGGACTTGAAGGTTCACATGGATTGTACTCGTTTGATGGTGCCAGCGGAGAAGCACCGGGATATGGCGGCATGAGTCTCCGGCCAAAGGCGTCAGCTTCCGGGTTGATATCTCAACTGGCTTCAGTGAAAATGGAAGACAACAACAACAACAACAATCTGAATTTGTCGGGCCAATTTCTGGGAAGTGATCAGTATTGGGGTACTACTGGTGGTGGAGGTTCTACTTCTGCTTGGACTGATCTTTCTGGGTTTAGCTCATCTTCAACTACTAGCAATCCACTATAG 1152 0.526 MVFTSIPPYLDPANWQQQQSNHHHTGALAGGGALSSQHHQHQQQQQQQLLSPPHPLPPALPQPQPHGGGGTSSIRPGSMADRARMANIPMPEASLKCPRCESANTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSSKGSSSKSPASSDRQAGSTSSTNSVSSNSNSAGDLIGLTPHTPPLRFMSPLLADFTAAGGDMGLTYGVNYNAISAPMGGIVSDLNFQIGSAFGGGGGGGSGSGGTTTAVAGSSGGSILFAPGLEQWRVPQTQQFPFLAAGLEGSHGLYSFDGASGEAPGYGGMSLRPKASASGLISQLASVKMEDNNNNNNLNLSGQFLGSDQYWGTTGGGGSTSAWTDLSGFSSSSTTSNPL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1797 383 MobiDBLite consensus disorder prediction 35 50 - -
Acco07g1797 383 Pfam Dof domain, zinc finger 94 149 IPR003851 GO:0003677|GO:0006355
Acco07g1797 383 MobiDBLite consensus disorder prediction 153 186 - -
Acco07g1797 383 MobiDBLite consensus disorder prediction 13 77 - -
Acco07g1797 383 ProSiteProfiles Zinc finger Dof-type profile. 95 149 IPR003851 GO:0003677|GO:0006355
Acco07g1797 383 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 39 178 IPR045174 GO:0003700|GO:0006355
Acco07g1797 383 ProSitePatterns Zinc finger Dof-type signature. 97 133 IPR003851 GO:0003677|GO:0006355
Acco07g1797 383 MobiDBLite consensus disorder prediction 139 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1797 Acco-ChrAcco07 34831457 34832842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1797 1 376 C2C2-Dof Transcription Factor Family AT2G37590 37.245 3.70e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco07g1797 zf-Dof 3.4e-32 No_clan