Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1793 ATGAATATTGGTGGGGTGGAACCGCAAGTAGTGGAAGTTGGAGATTTCTTTGAAGAAGAGAAACAAACAGTTATGGCGGCGGTTAAAGAGCGAGAGATCTGGCTTCACAATAATAACAACAATGTTTATATTAATAATAATGGCCATCACCCCCAAGATCATCATCATTACGATCAGGATGATGATCTTCTTGCCGGTGTAATGGACGATGCTGCTTCTCTGTTTTACGCCGACGACTTCCCTTGTCTTCCAGATTTCTCATCATGCATGTCGTCTTCTTCGTCTTCGTCGTCACCGCCAGCCACCGCCATGGTCAAAACCACCGTAGGGTGCGTCACCTCGTCTTCCCATACTTCTTCGTCTGATTCGGCAGAGACTCCTCTCCTCCCGCCGCCGCCACAGCAGGCGGCAGCGGCGGCTTTGTCCTCCGCTACTTCTATGGAGATCTCGCAGCAGACGGATCATCGAGAAGGTGGCTGCGCTGACGGCGGAGATTGTGTGTACATGATGGACACATTTGGGAATATGGAACTGATGGAGAGCAACGAATTCTTCGATCCTTCATCAATCTTTGAGAATGAAGAGAATCTATTGGACGAGTTGACTCAGTTTGACCCGGTGAATAACCCGCCGGAAGTAGAGGGACATGCAAGCGGTGGAATGATGGTATTACAGGAGGAACGGCAACAGCAATCGCCGCCACCTTTGGCAGCGGAGGCGATGGTGACGGATGAAGAGATGAGCTCGGTGTTCTTGGAGTGGCTAAAGATGAACAAAGATAGCGTGTCGGCGAGTGACTTGAGGAGCGTGAGACTGAAGAAGGCGACAATAGAATGTGCAGCAAAGCGACTCGGGGGAGGAAAAGAAGGCATGAAGCAATTACTGAAGCTAATTCTTGAATGGGTTCAAACCAGTCATCTTCAAAAGAAAAGAAGAATGGATTATCATGTTAATAATGACAATCTTTTCATGGCTGATCAGGATACCACAAACCCTACTTCTGATTTGAACCACCAACCTTCATTTGGATCGGAATGGATCTCTCAGCCTCCGGCAGCTGCTGTTCTTGCCCCGCCGCCATTTTCGCAACCAGTGGTTGGGTATAGTAATAATAACAACATGGTAGACCCGTTTTCAAGTGAGTTTCAGGCGATCGATTCTACTCATTCTCAGTTCGGTGTTTACAATAACAACCACCCATTTGGGACGACGATGGCGGCATATGGCGGTTATGCGAACAGTCAGTATCCTTATCAATATTTGCAGGGCGGCACCGGCTTGGATAGATTGGGTCCGTTGGCGACGAAAGAAGCGAGGAAGAAGAGAATGGCGAGGCAGAGAAGGAATGTATCTCATCATCATCAAAGGCAACACAATGTGCAAGGACAACAACAAAACCAGCAGAATCAAACAAGGGATTATTGCACCGGTGCTGCTACAGCTGCCCCACCGCATGCAAATCCACCCAACTGGATGTATTGGCCGCCGCCACCTGTGGCTGGGTCCAATGGTGGAGGAGCCGCTTCTGTTGCGCCAATGGCTCAGGCAGAGCCGCCACCGTCCACGATGAATGGGAGAAATGCGAGGGATCAGAGTACGCCCATGCAATCCGAACAGAATCATCAACGAAACCGAGTCTCATCAGATAAACGACAGGGATGGAAGTCTGAGAAGAACTTGAAGTTTCTTCTGCAGAAGGTGTTAAAGCAAAGCGACGTGGGTAATCTGGGGAGGATAGTGTTGCCAAAGAAAGAAGCAGAAACTCATTTGCCAGAACTGGAGGAAAGAGATGGGATTTCAATAGCAATGGAAGACATCGGGACTTGTCGTGTTTGGAACATGCGCTACAGATACTGGCCAAACAACAAAAGCAGGATGTATCTGCTTGAGAATACTGGAGATTTTGTGAGAGCCAATGGACTTCAGGAAGGAGACTTCATAGTCATATATTCAGACGTCAAATGTGGGAAATATATGATAAGAGGAGTGAAGGTGAGGCAAGCTGCAGGGTCGAAACCTGAGACGAGGAAAGCAGCAAAATCATCCCACAAGGTTAACGGGAAGGACGTGCGGCATTTTCGCAATTGA 2088 0.4847 MNIGGVEPQVVEVGDFFEEEKQTVMAAVKEREIWLHNNNNNVYINNNGHHPQDHHHYDQDDDLLAGVMDDAASLFYADDFPCLPDFSSCMSSSSSSSSPPATAMVKTTVGCVTSSSHTSSSDSAETPLLPPPPQQAAAAALSSATSMEISQQTDHREGGCADGGDCVYMMDTFGNMELMESNEFFDPSSIFENEENLLDELTQFDPVNNPPEVEGHASGGMMVLQEERQQQSPPPLAAEAMVTDEEMSSVFLEWLKMNKDSVSASDLRSVRLKKATIECAAKRLGGGKEGMKQLLKLILEWVQTSHLQKKRRMDYHVNNDNLFMADQDTTNPTSDLNHQPSFGSEWISQPPAAAVLAPPPFSQPVVGYSNNNNMVDPFSSEFQAIDSTHSQFGVYNNNHPFGTTMAAYGGYANSQYPYQYLQGGTGLDRLGPLATKEARKKRMARQRRNVSHHHQRQHNVQGQQQNQQNQTRDYCTGAATAAPPHANPPNWMYWPPPPVAGSNGGGAASVAPMAQAEPPPSTMNGRNARDQSTPMQSEQNHQRNRVSSDKRQGWKSEKNLKFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEERDGISIAMEDIGTCRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQAAGSKPETRKAAKSSHKVNGKDVRHFRN 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1793 695 SUPERFAMILY DNA-binding pseudobarrel domain 563 658 IPR015300 -
Acco07g1793 695 MobiDBLite consensus disorder prediction 436 554 - -
Acco07g1793 695 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 249 693 IPR044800 GO:0003700
Acco07g1793 695 MobiDBLite consensus disorder prediction 520 542 - -
Acco07g1793 695 Gene3D - 554 672 IPR015300 -
Acco07g1793 695 FunFam B3 domain-containing transcription factor FUS3 560 674 - -
Acco07g1793 695 SMART B3_2 564 666 IPR003340 GO:0003677
Acco07g1793 695 MobiDBLite consensus disorder prediction 671 695 - -
Acco07g1793 695 CDD BfiI_C_EcoRII_N_B3 562 663 - -
Acco07g1793 695 Pfam B3 DNA binding domain 565 661 IPR003340 GO:0003677
Acco07g1793 695 MobiDBLite consensus disorder prediction 114 161 - -
Acco07g1793 695 MobiDBLite consensus disorder prediction 138 153 - -
Acco07g1793 695 ProSiteProfiles B3 DNA-binding domain profile. 564 666 IPR003340 GO:0003677
Acco07g1793 695 MobiDBLite consensus disorder prediction 440 455 - -
Acco07g1793 695 MobiDBLite consensus disorder prediction 456 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1793 Acco-ChrAcco07 34780449 34784666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1793 18 695 B3 DNA Binding Superfamily AT3G24650 44.804 2.79e-151 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Acco07g1793 B3 2.3e-17 CL0405