Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1786 ATGGTCTTGATCCAACAGGGAGAGACTGAAGAGAAAGTCGTGAATCCCTCTGAATCTGCGAAAACTGCAAAATCGTCAGCCTCCTCCAATGTCGATGACCCTAAAGAAGCTTCCGATGGGTTTGAAACCGCCAGCGACACCGAGCTCGGCAGCGACGCAGAGGATGCGCATAAAGAACGGGAACAACAACATCAACATCAGGAGCTGAGGAATCCTCCGGGGACTGATTCTTCCGAAGAGGCATCACACGATGAGGAATTAAAACAGAAAGCATTGGCTCAAGCAAACAATGCAAAATTAGAAGGGAATAAGCTATTTGTGGATGGGCAATTTGAGGAGGCATTATCAAAGTATGAGCTCGCTTTACAAATTGCTCCAGATATGCCTTCATCTATTGAAGTACGCTCAATATGCCATTCAAATCGTGGTGTATGCTTTATGAAATTGGGGAAATATGAGGACACAATCAAAGAGTGCACTAAGGCATTGGAACTCAATCCTGCATATCTGAAATCTTTGGTGAGAAGAGGTGAAGCACATGAAAAGCTTGAGCATTTTGAAGAGGCCATTGCTGATATGAAGAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAGAACCATCCGGAGATTGGAGCCTCTAGCAGCAGAAAAGCGGGAGAAGATGAAGGAAGAAATGATTGGAAAACTGAAAGAAATGGGCAATTCTTTGTTGGGCCGTTTTGGGATGAGCGTTGACAACTTCCAAGCTATTAAAGATCCGAACACTGGTTCATATTCCATCTCATTCCAACGCTAA 804 0.4391 MVLIQQGETEEKVVNPSESAKTAKSSASSNVDDPKEASDGFETASDTELGSDAEDAHKEREQQHQHQELRNPPGTDSSEEASHDEELKQKALAQANNAKLEGNKLFVDGQFEEALSKYELALQIAPDMPSSIEVRSICHSNRGVCFMKLGKYEDTIKECTKALELNPAYLKSLVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARRTIRRLEPLAAEKREKMKEEMIGKLKEMGNSLLGRFGMSVDNFQAIKDPNTGSYSISFQR 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1786 267 Pfam Tetratricopeptide repeat 173 203 IPR013105 -
Acco07g1786 267 MobiDBLite consensus disorder prediction 1 86 - -
Acco07g1786 267 ProSiteProfiles TPR repeat profile. 136 169 IPR019734 GO:0005515
Acco07g1786 267 SUPERFAMILY TPR-like 94 213 IPR011990 GO:0005515
Acco07g1786 267 MobiDBLite consensus disorder prediction 10 33 - -
Acco07g1786 267 MobiDBLite consensus disorder prediction 50 67 - -
Acco07g1786 267 ProSiteProfiles TPR repeat profile. 170 203 IPR019734 GO:0005515
Acco07g1786 267 SMART tpr_5 136 169 IPR019734 GO:0005515
Acco07g1786 267 SMART tpr_5 95 128 IPR019734 GO:0005515
Acco07g1786 267 SMART tpr_5 170 203 IPR019734 GO:0005515
Acco07g1786 267 Pfam Tetratricopeptide repeat 138 168 IPR001440 GO:0005515
Acco07g1786 267 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 23 267 - -
Acco07g1786 267 Gene3D Tetratricopeptide repeat domain 55 234 IPR011990 GO:0005515
Acco07g1786 267 ProSiteProfiles TPR repeat profile. 95 128 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1786 Acco-ChrAcco07 34700170 34703592 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1786 95 226 Calmodulin-binding Proteins AT3G25230 36.429 3.98e-14 70.1