LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco07g1776	ATGTTTGGGGAAAACAGTTATGCATATTTCCTGGCCTATGATTGGATTCGGGATGACAGAGTTCAGGAAGCACTGCATATTCGAAAGGGTACCATAAGGAACTGGGTAGGTTGTAAATCCGATGAGTATGATTTCGACATCATCAATTCCGTTCCATATCATATGAATCTAAGTCGAAAAAGCTATCGTTCATTGATTTACAGTGGAGATCATGATCCATTAGTTCCATTTATGTCAACTCAAGCATGGATTAGAGATTTAAACTACTCCATTGTCGAAGACTGGAGACCTTGGCTTGCAAATGGCCAGAAGAAGAAGAAGAGGGACACCAAAATCCGAAGAAGACAAGAAGGTCAAAATCGTAGGATGATAGAGATTCTTGTTGTTTCTTTTGTTTTGTTGCAGATTTGTTCTCAAGTTGCAACTTCTGGTTCACATGTGGAGTACCTTCCTGGTTTTGAAGGCCCTCTTCCTTTTCATCTTGAAACTGGGTATGTCGGTGTGGGAGACTCAGCAACAGAACAAGGAGGAGGACAAGTGTTCTATTACTTTATTGAGTCAGAGAACAATCCAAAAGAGGACCCTCTTATGCTTTGGCTCACTGGTGGCCCCGGTTGCTCTTCATACTCAGGCCTCATTTTTGAAATAGGTCCAATCGCAATCAAAATTGAGAAATACAATGGTAGCCTCCCAAATTTGGTTTTGAGGCCACAAGCTTGGACAAAGGTGAAATATATACAGTACAATTTTCAAGAATGCAGTATAATATTTGTAGATTTGCCTGTTGGCAGTGGCTTCTCTTATGCGTACACCCCTTATCTTCAACGAGGTGATTGGGGTTTAATTAAACATGCCCATCAATTTCTTAAGAAGTGGCTAATTGATCACCCAAAATTTCTGAAAAATCAAGTTTATATTGGTGGTGACTCATATTCTGGCCTTCCTATTCCAGCTATTGTTCAAGAAATTTCAAATGGTAAGAAACTCTCAAAGAATTATGGATATTTCCTGGCCTATGATTGGATTCGGGATGACAGAGTTCAGGAAGCACTGCATATTCGAAAGGGTACCATAAGGAATTGGGAAGTTTGTAAATCCGATGACTATGATTTCGACATCATCAGTTCCGTTCCATATCATATGAATCTAAGTCAAAAAGGCTATCGTTCTTTGATTTACAGTGGAGATCATGACCCAGTAGTTCCATTCATGGCAACTCAAGCATGGATTAGAGATTTAAACTACTCCATTGTCGAAGACTGGAGACCTTGGCTTGCAAATGGCCAGGGTGCAGGACATGTAGCTCCTGAGTACAAACCTGAAGAATGTTTTGAGATGTTCTTTCGGTGGATATCTAATAAGCCTTTGTAG	1371	0.4019	MFGENSYAYFLAYDWIRDDRVQEALHIRKGTIRNWVGCKSDEYDFDIINSVPYHMNLSRKSYRSLIYSGDHDPLVPFMSTQAWIRDLNYSIVEDWRPWLANGQKKKKRDTKIRRRQEGQNRRMIEILVVSFVLLQICSQVATSGSHVEYLPGFEGPLPFHLETGYVGVGDSATEQGGGQVFYYFIESENNPKEDPLMLWLTGGPGCSSYSGLIFEIGPIAIKIEKYNGSLPNLVLRPQAWTKVKYIQYNFQECSIIFVDLPVGSGFSYAYTPYLQRGDWGLIKHAHQFLKKWLIDHPKFLKNQVYIGGDSYSGLPIPAIVQEISNGKKLSKNYGYFLAYDWIRDDRVQEALHIRKGTIRNWEVCKSDDYDFDIISSVPYHMNLSQKGYRSLIYSGDHDPVVPFMATQAWIRDLNYSIVEDWRPWLANGQGAGHVAPEYKPEECFEMFFRWISNKPL	456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco07g1776	456	SUPERFAMILY	alpha/beta-Hydrolases	4	103	IPR029058	-
	Acco07g1776	456	SUPERFAMILY	alpha/beta-Hydrolases	147	455	IPR029058	-
	Acco07g1776	456	Gene3D	alpha/beta hydrolase	3	125	IPR029058	-
	Acco07g1776	456	Gene3D	alpha/beta hydrolase	334	456	IPR029058	-
	Acco07g1776	456	Gene3D	alpha/beta hydrolase	140	333	IPR029058	-
	Acco07g1776	456	Pfam	Serine carboxypeptidase	7	106	IPR001563	GO:0004185\|GO:0006508
	Acco07g1776	456	Pfam	Serine carboxypeptidase	337	426	IPR001563	GO:0004185\|GO:0006508
	Acco07g1776	456	Pfam	Serine carboxypeptidase	151	331	IPR001563	GO:0004185\|GO:0006508
	Acco07g1776	456	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	339	440	IPR001563	GO:0004185\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco07g1776	Acco-ChrAcco07	34516514	34530008	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco07g1776	337	456	Calmodulin-binding Proteins	AT2G22960	56.835	1.57e-43	149