Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1752 ATGGCCTTGCAGGGAACGGAGAACGCATGCGAAGATACAAATCTTGTAGACAATGAAGGAGAAGAATTTTCCAAATCCTTTGTTTGCTGCGTTTGTCTGGATCTATTGTATAAACCCATTGTACTGTCATGTGGTCACATATCATGCTTCTGGTGTGTCCATCAGTCAATGAACCCCCTATGTGAGTCTCATTGTCCAATTTGTCGGAATCCATATTATCACTTTCCAACAATCTGTTGGATGCTTCACTTTTTGCTTCTGAAGATGTATCCTGTTGCTTACAAGAGAAGGGAAATTCAAACTCTCGAGGTAGAAAAGAAAGAGGACTGCTACTCTCCTCAATTTGATGATGAAAATGTTGTATCGGATGTTACGTTTGATCATCCAAGTACTTCATCTTCCTGCTATGCTGTAAATGTGGTTTCCAACCCACAGAATGCTGGACTTTCTGCAAGTATGGAGCAATCAGGTTCTGAAACTCAAAAGCAACATAAGGGCACCATGTGTTTGAAAGATTTTTTTGGTGGAAGTCCTGAAGCTTTTGGGACTTCTGCTCAAGTAAAAATGATGCCTCCGAATGATGGGCAACAGAAGGTATCAGTTGCAGATGTGATGTGTTCAGCATGCAAGCAACTTCTTTTTCATCCTGTTGTTCTTAACTGTGGTCATGTATTCTGTGAGTCTTGTATCAAGAACTCAGCCAATGAGATGCTTAGATGTCAAATTTGTCAACTTCCACATCCAAGGGGACTTCCAAAAGTTTGTTTGGAGCTTGATCACTTTATAAAGGAACAATTTCCAGAGGAATATGGAAAGCAAAGAGATGCCCTTCAACTGAGGAATATCAATGACAAACCTGAAACCCCTTCCTGTTCTCTTAATAATGTTGGAGGAGGAAAAGCAGCATGGTGGTCTGATCCTAACTCAAAAGTACATGTTGGAGTTGGTTGTGATTTTTGTGGGATGTTTCCAATTGTTGGAGATAGATACAAATGCAAAGACTGTAAGGAGAAGGTTGGTTTTGATCTTTGTGCTGATTGTTATAAAATTCACAGCAAGATTCCTGGTCGATTCAATCAGCAGCATACTCCAGATCATGAGTTTGAGCTTATGCAAATTAGCGTTATGCATAACATAATGAGGCTGGTTACTGGACATTTAGGAGATGGTTCAATTGAAAATTTCCCCCTGGAAGGCATAGAGTTTAGACCTGAAGATCCGGATTTAGTAGGTGATGGTGATGGAGAACATACTCAGAATGACTCTGAAGGCACCGATTGA 1281 0.4044 MALQGTENACEDTNLVDNEGEEFSKSFVCCVCLDLLYKPIVLSCGHISCFWCVHQSMNPLCESHCPICRNPYYHFPTICWMLHFLLLKMYPVAYKRREIQTLEVEKKEDCYSPQFDDENVVSDVTFDHPSTSSSCYAVNVVSNPQNAGLSASMEQSGSETQKQHKGTMCLKDFFGGSPEAFGTSAQVKMMPPNDGQQKVSVADVMCSACKQLLFHPVVLNCGHVFCESCIKNSANEMLRCQICQLPHPRGLPKVCLELDHFIKEQFPEEYGKQRDALQLRNINDKPETPSCSLNNVGGGKAAWWSDPNSKVHVGVGCDFCGMFPIVGDRYKCKDCKEKVGFDLCADCYKIHSKIPGRFNQQHTPDHEFELMQISVMHNIMRLVTGHLGDGSIENFPLEGIEFRPEDPDLVGDGDGEHTQNDSEGTD 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1752 426 SUPERFAMILY RING/U-box 304 371 - -
Acco07g1752 426 FunFam E3 ubiquitin-protein ligase PRT1 193 288 - -
Acco07g1752 426 Pfam Zinc finger, ZZ type 312 350 IPR000433 GO:0008270
Acco07g1752 426 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 290 IPR013083 -
Acco07g1752 426 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 137 IPR013083 -
Acco07g1752 426 SUPERFAMILY RING/U-box 201 247 - -
Acco07g1752 426 MobiDBLite consensus disorder prediction 403 426 - -
Acco07g1752 426 ProSiteProfiles Zinc finger RING-type profile. 206 244 IPR001841 -
Acco07g1752 426 ProSiteProfiles Zinc finger RING-type profile. 29 69 IPR001841 -
Acco07g1752 426 SMART ring_2 29 68 IPR001841 -
Acco07g1752 426 SMART ring_2 206 243 IPR001841 -
Acco07g1752 426 SMART zz_5 311 357 IPR000433 GO:0008270
Acco07g1752 426 FunFam E3 ubiquitin-protein ligase PRT1 306 371 - -
Acco07g1752 426 SUPERFAMILY RING/U-box 21 78 - -
Acco07g1752 426 ProSiteProfiles Zinc finger ZZ-type profile. 312 376 IPR000433 GO:0008270
Acco07g1752 426 PANTHER UNCHARACTERIZED 21 372 - -
Acco07g1752 426 ProSitePatterns Zinc finger RING-type signature. 221 230 IPR017907 -
Acco07g1752 426 Pfam RING-type zinc-finger 206 240 IPR027370 -
Acco07g1752 426 FunFam E3 ubiquitin-protein ligase PRT1 20 115 - -
Acco07g1752 426 Gene3D - 305 372 IPR043145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1752 Acco-ChrAcco07 33997431 34003637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1752 14 69 C3H Transcription Factor Family AT1G74990 38.596 8.87e-08 49.3