Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1724 ATGCCATTAGCGGATAGCAATCGAGAGTCACTAGCCGGATTAACCCTCGACGACGTGTTAGCCAACCGAGCCGCCGCCGCCGCCGCAACGTCGAGCCATCAGCTCACAACAACAACAACAACCAACAATCATCGAACCCTGCTTGACATCATCCGTGAAGACGAGTCTTCCAAAAAAGATCGCAGATCTTGGAAAGCTTTCAAAGATAAGCTTCGGCTTAAACGCATCGAATCTGCTTGGGCTTCCTCTGTCCTAATTCCAGCTTCCGATATCCCTTTCACGATCCGGAATTCCAGAAGCCTTCCGACACAGCTTCACCGTCGTAGCTCCATCCGAGTCCTTACATTCTCCGACGTCACGACTCACTGTATGGCAGATCCCACCGAAGAAGCCATCAAGAGTTCCAACCTCGCCGCCACAATGATGACGCGCCAGAGATCCACGCGCCAACAGGTCGGGGATGCAATTTTCATCGACGAGAAACTCAAGCCTCAGATGTCCCGCCCGCTCTCCTCACGTCTGGGTTCGTTACGCTCGGATTCCATCCGGCGAGAGCGCGTGGTGACGTTCCGTGACGGCAACATTGACAATGACGACGACGATGAGGATGGAGACGGCCAGACGCGCCGTCCGAATAAGGAGAGGCAGATGTCTGCTAGGGAGGCCGTGGCAGCGCAGGAAGCGGCGGAGGCTGCGGCGGCGGAGGAGGAGGAAGAGGAAGATGAAGATGAAGGGCCGTTTGGGAATGGAGGAGGACGAGGAGGTGCGGTAACGATGTCGCTGATGGACTTGTTGGAGGAGACGGATCGGCAAATGGGACTGCAAGGATCGTCGTATAGAATGGACTTCGACGACGACGACGACGACGATTTTGATTTTGATGAAGATGAAGACGATTATGAAGAAGGTGAAGAGCACGATTGTTGCGTGTGTATGGTGAAGCATAGAGGTGCGCCATTTGAGCCGTGTGGGCATTCATTTTGCAGGATGTGTTCTCGGGAGCTCACTGTGAGCAAGGCAAATTGTCCTCTCTGCAACAATTTTATCCTGGAGATTCTTGAGGTTTTCTGA 1071 0.5369 MPLADSNRESLAGLTLDDVLANRAAAAAATSSHQLTTTTTTNNHRTLLDIIREDESSKKDRRSWKAFKDKLRLKRIESAWASSVLIPASDIPFTIRNSRSLPTQLHRRSSIRVLTFSDVTTHCMADPTEEAIKSSNLAATMMTRQRSTRQQVGDAIFIDEKLKPQMSRPLSSRLGSLRSDSIRRERVVTFRDGNIDNDDDDEDGDGQTRRPNKERQMSAREAVAAQEAAEAAAAEEEEEEDEDEGPFGNGGGRGGAVTMSLMDLLEETDRQMGLQGSSYRMDFDDDDDDDFDFDEDEDDYEEGEEHDCCVCMVKHRGAPFEPCGHSFCRMCSRELTVSKANCPLCNNFILEILEVF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1724 356 PANTHER OS01G0917900 PROTEIN 7 356 - -
Acco07g1724 356 SMART ring_2 308 345 IPR001841 -
Acco07g1724 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 356 IPR013083 -
Acco07g1724 356 SUPERFAMILY RING/U-box 307 352 - -
Acco07g1724 356 MobiDBLite consensus disorder prediction 188 257 - -
Acco07g1724 356 Coils Coil 219 244 - -
Acco07g1724 356 CDD RING-HC 308 345 - -
Acco07g1724 356 MobiDBLite consensus disorder prediction 231 245 - -
Acco07g1724 356 Pfam Zinc finger, C3HC4 type (RING finger) 305 349 - -
Acco07g1724 356 ProSiteProfiles Zinc finger RING-type profile. 308 346 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1724 Acco-ChrAcco07 33619439 33620509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1724 1 356 C3H Transcription Factor Family AT3G07120 40.306 1.59e-45 157