Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1703 ATGCTAAAGGAAACGAAGCGAGAAAGAAAGAGGTCTCTTATTTTGTCCATTGAAATGGCTGTTCCAAAAGTGGACAAAAAGATGCTTGAAGAACTTGAAGCAATGGGATTTCCTAAAGCAAAGGCAACTCGAGCACTCCATTATTCTGGCAATAAAAATGTAGATGATGCTATAAATTGGATAGTTGATCATGAGAATGATCCTCATATTGATGAGATTCCATTGTTAGACTTAGATATTGAGATTGGTTCTTCTCAATCATTCCCTATAACAGAAGAAATGGAAATCAAAGCACAGAAGCTACGGAAGATTAGTTCTAATCATTCATTCCCTATCACAGAAGAATCAAGAATCAAAGAACAGAAGCTAAGTAGGGAACAATTGCATAAGATGAAAGAAGAGAAAGAAAAGGAATTGGAGATAGAAAGGGAAAAGGAGAGAATCCAAGCAGGTAAGAAACTCAATGAGATGAAGCGAATAGCTGAAGAGAATGAAAGGCAACGAAATATAGCCTTGCGGAAAGCAGAGAAAGAAGAAGAGAAAAGAGCAAGGGAAAAAGTCATGCAGAAACTAGAACAGGATAAGTTAAACAGAAGGTCTATACTTGGGTTGCCCCTAGAAGGCCATGCAACCGTAAAAACTTCAGCCACAACAGTACAGAAAGAACAGAATCCAAAGCCTGTTTACACTGTTACAAAAGTTGATCTCCTGAGAGAATGTTTGAGGTCCCTCAAGCGTAACCACCAGGATGAGCATGCGAGAGTTAGAAGGGCCTTTGAAACACTCTTAATTTATGTTGGGAATGTTGTCAAGAATCCCAACCAGGAAAAATACAGGAAGATCCGATTGAGCAACCCATTATTCCAGGATAGGGTTGGGAGTTTGTATGGAGGTGTGGAATTTCTTGAACTATGTGGGTTTGAGAGAATGGGTGACTTTTTATGTCTTCCTGAGGAAAAGTTGGACATAACACTACTAAATTCAGCTGGATTTGTGTTGAAGTCTGCTATTACAAATCCCTTCTTTGGACTTTTTAGCACTCGAACATTGTTCTAA 1056 0.3883 MLKETKRERKRSLILSIEMAVPKVDKKMLEELEAMGFPKAKATRALHYSGNKNVDDAINWIVDHENDPHIDEIPLLDLDIEIGSSQSFPITEEMEIKAQKLRKISSNHSFPITEESRIKEQKLSREQLHKMKEEKEKELEIEREKERIQAGKKLNEMKRIAEENERQRNIALRKAEKEEEKRAREKVMQKLEQDKLNRRSILGLPLEGHATVKTSATTVQKEQNPKPVYTVTKVDLLRECLRSLKRNHQDEHARVRRAFETLLIYVGNVVKNPNQEKYRKIRLSNPLFQDRVGSLYGGVEFLELCGFERMGDFLCLPEEKLDITLLNSAGFVLKSAITNPFFGLFSTRTLF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1703 351 SUPERFAMILY UBA-like 21 74 IPR009060 GO:0005515
Acco07g1703 351 Coils Coil 118 151 - -
Acco07g1703 351 Coils Coil 154 197 - -
Acco07g1703 351 CDD UBA_PUB_plant 24 71 - -
Acco07g1703 351 Gene3D - 239 335 - -
Acco07g1703 351 Pfam PUB domain 254 322 IPR018997 -
Acco07g1703 351 Gene3D - 25 70 - -
Acco07g1703 351 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 23 64 IPR015940 -
Acco07g1703 351 PANTHER F13M7.16 PROTEIN 17 344 - -
Acco07g1703 351 SMART uba_6 25 63 IPR015940 -
Acco07g1703 351 SMART PGNneu 257 318 - -
Acco07g1703 351 Pfam UBA/TS-N domain 25 61 IPR015940 -
Acco07g1703 351 SUPERFAMILY PUG domain-like 228 341 IPR036339 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1703 Acco-ChrAcco07 33302706 33306706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1703 18 345 C2H2 Transcription Factor Family AT1G04850 53.614 2.08e-93 280