Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1690 ATGCTACCTCCCCGTCAACAATCTCGTGCTGGAGGACTCCAAACTTCACTATCCCTCCTTTCTTCAGATCCTCGTCACTCTCCTGAGGAACCCAGATCAAATTCTGACAATATTCGGGAATCCCCTACTGAAAGTGCTAGTTCACGAGAAACTTGGCCCACTGCGGAAGCTACTGCAGGAAAGAAGATGGATAACGGGAAGGCTGAGAATGATTTCCCTGAACAGGCAGTCATCCGTCGTATTTCTAGTGCTGACAAAATCACTCTTCAGGACATAGGAAGAGAAAGGGTTGACATGATCTCTGAAAAGATGGAACATCTACCTGAAGAATTTTTAGAACAGCTGAAGAATAGTCTTCGAGTGATCCTTGAGGGAGGAAATGGTTCACAACACAGGGAGGAATTCTTCAATTTGCAGAAGCTTGTTCAGAGTAGAACTGATTTAACAGCCAAGACATTGATTAGAGCACATCGTGTGCAACTTGAAATCCTTGTTGCTATTAACACTGGAATTCAGGCATTTTTGCATCCCAACATCAGTCTCTCACAAACTTCCCTCATTGAGATCTTTGTGTACAAGAGATGCAGAAACATAGCCTGTCAAAACCTGCTTCCTGCTGATGACTGTACCTGTGAAATATGCACGAGCAGAAATGGTTTCTGCAATCTCTGCATGTGTGTGATCTGCAACAAGTTTGACTTTCAAGTAAATACGTGTCGCTGGGTTGGGTGTGATTTATGCTCTCATTGGACTCATACAGATTGTGCCATTCGTGATCAACTTATTTGCATGGGTCCTTCTGCAAAGAGTGGCGCAGGACCAAGTGAAATGGTTTTCAGGTGCCATGCATGCAAGAGGACTTCAGAGCTGTTGGGTTGGGTTAAAGATGTTTTTCAGCATTGTGCGCCATCTTGGGATGGGGAGGCATTAATGAGGGAACTTGATTATGTTAGTAGGATCTTTCATGGTAGTGAGGACCCAAGAGGGAGGAAACTATTCAGGAAGTGTGATGATCTAAAGGAGAAAATGAAAAGTGGAAGGGTGGAACCAAATGCTGCCTGCAGTGCAATATTGATGTTTTTCCAAGAGCTTGAGGTTGACTCTCCAAAGAGCCTTGAAAATGGCGAAAGTGGAAGGATGATTGCTCCACAGGAGGCATGCAATAGAATTGCTGATGTGGTGCAGGAGGCTATAAGAAAAATGGAATTGGTGGCTGATGAGAAGATGAAAATGTTCAAGAAGGCTCGCTTGGCTCTTGAGGCTTGTGATCGAGACTTAGCAGATAAGGCGAGGGAAGCAGCAGAACTCAAGATGGACAGGCAAAAAAAGAAATCACAGATAGAAGAACTGGAGAGAATTGTAAGGCTAAAAACTGCAGAGGCTGATATGTTCCAGCTTAAGGCTAATGAGGCTAACCGAGAGGCTGAGAGGCTTCAGAGGATTGCTCTTGCCAAATCGGATAAATCAGAGGAAGAATATACTAGCAACTACCTGAAACAACGATTAAGTGAGGCTGAAGCTGAGAAGCAATATCTCTATGAGAAGATCAAATTGCAGGAGGGTTCTCGTGCTTGGCAGAGTAGTGGTGGTGACCCATCTCAGATTCTGATGTATTCCAAAATCCATGATCTGCTCTCCCAAGGCAGATAG 1650 0.4436 MLPPRQQSRAGGLQTSLSLLSSDPRHSPEEPRSNSDNIRESPTESASSRETWPTAEATAGKKMDNGKAENDFPEQAVIRRISSADKITLQDIGRERVDMISEKMEHLPEEFLEQLKNSLRVILEGGNGSQHREEFFNLQKLVQSRTDLTAKTLIRAHRVQLEILVAINTGIQAFLHPNISLSQTSLIEIFVYKRCRNIACQNLLPADDCTCEICTSRNGFCNLCMCVICNKFDFQVNTCRWVGCDLCSHWTHTDCAIRDQLICMGPSAKSGAGPSEMVFRCHACKRTSELLGWVKDVFQHCAPSWDGEALMRELDYVSRIFHGSEDPRGRKLFRKCDDLKEKMKSGRVEPNAACSAILMFFQELEVDSPKSLENGESGRMIAPQEACNRIADVVQEAIRKMELVADEKMKMFKKARLALEACDRDLADKAREAAELKMDRQKKKSQIEELERIVRLKTAEADMFQLKANEANREAERLQRIALAKSDKSEEEYTSNYLKQRLSEAEAEKQYLYEKIKLQEGSRAWQSSGGDPSQILMYSKIHDLLSQGR 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1690 549 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 448 468 IPR004082 -
Acco07g1690 549 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 145 160 IPR004082 -
Acco07g1690 549 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 232 252 IPR004082 -
Acco07g1690 549 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 103 125 IPR004082 -
Acco07g1690 549 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 186 207 IPR004082 -
Acco07g1690 549 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 487 509 IPR004082 -
Acco07g1690 549 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 160 175 IPR004082 -
Acco07g1690 549 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 305 324 IPR004082 -
Acco07g1690 549 Pfam Coiled-coil region of Oberon 413 545 IPR032535 -
Acco07g1690 549 Coils Coil 419 488 - -
Acco07g1690 549 SMART PHD_3 225 285 IPR001965 -
Acco07g1690 549 MobiDBLite consensus disorder prediction 1 23 - -
Acco07g1690 549 MobiDBLite consensus disorder prediction 38 54 - -
Acco07g1690 549 MobiDBLite consensus disorder prediction 1 73 - -
Acco07g1690 549 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 27 547 IPR004082 -
Acco07g1690 549 CDD PHD_OBE1_like 225 284 IPR047578 -
Acco07g1690 549 PIRSF UCP025218 1 548 - -
Acco07g1690 549 Pfam PHD - plant homeodomain finger protein 195 318 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1690 Acco-ChrAcco07 33180409 33182810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1690 195 297 PHD Gene Family AT5G57380 31.731 1.31e-08 55.8