Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1682 ATGTCTCATTTCTCTTTCTCAAAGCAAAAAACCAGTGACTTGTCTTCTCTAGTCTTCAATTTCTGCTTCTCCGTCTTCTCTCACCCTCTTTACTTCTCTTACTTCATCTTCTTCTCTCCTTACATTCTCAAGCTTGTCTCTTTCCTTTCACCTCTCTTCATCACCACCACCCTCCTCCTCCTTGCCCTCTTCACTGTATCTCCTAGTTACTTTGTCTTGGACGCTGATGATGACTCTGAATTTTCTGAATCCAAATTGGGTTTTCTTCTTTCTAATTTCCAGAATCTTATTCTGTGGCTTCACTCAAAAAGTAATCAGAAAGATGAGGAAAGTGGGTATCTTGAGGAGTTTGAAGCTTACTTGGTTATGTTTCAAGCCTCCATCTTTCAAGCTCTGGAGGCAAAACCAGAGGAAAATGAAAATAGCCCACAATGCCTTGAAGAAGCTGACGATCCAGTTGAGAATAATATGTCAGTTTCAGAAGTAAAAAGCCTTGAGAGCTTGTTTCATGAAAGTGAAGATTTTGAAGATTTGGGTCATCAGAAAGAAGCAAAAGCAGGTGGAGAAATGAAAGTCCTGGAGAATTTGTTCAGAGAAGATGAAGAATTTGAAGGTTTAGTTCTTCAAAAGGAATCTAAATCAGCTGACTCAGAAGAAGTGACCAAAGGGAAAATGGAGAGTGACACAAAAATGGATGATGGTGAAGTAGAAAAGAAGGTTCTAGAAGAAAGTGAAGAGAAGAAAGGGAGAATAATAGGGATGAGAAGTGGATTCAAAGTGATGAATAGTAAATCTCAGAGGCTTCTAGAAGCAAGTCTTGGGAGTCCAGAGAACAACTGGATTTACAGTGAATCGAATCACTTGGGGAGTTTTGGATCAATGAGGAAAGAGAAAGAATGGAGAAGGACCTTGGCTTGCAAGCTTTTTGAAGAGAGACACAATAATAGCAGCAAATTTATCAGCAACAACAACATTAATGGAAGTGAAAGTGAAGGCATGGATTCACTGTGGGAGACATATGAGACAGAGCCTAACAAACCCAAGAACAATAACGACAAGAAGAAGAAGACGACAACGAAGACGGTTCTGGAGAAAAGCAATACAAAGAAGAGTACTGAGAGTAAGTATTATGATTTAGAGGATGAAGATGATGAAGAAGAGGAAGAAGAAGAGGGAATCAAATTGTGCTGCTTGCAGGCTCTGAAATTTTCGGCAGGGAAGATGAATCTGGGGATGGGAAAGCCTAATCTCATGAAAATTTCTAAAGCTTTCAAGGGAATTGGATGGCTTCACCACCATGTAAGCAAGCATGGCAAAAAGGGGCATATATTAATTTTAACTTATAAGGAGAATTCAAATCATGCAGTTTCAAGGCTTCTGGTTATTGAAAATGTCAAGTTCTGGCTTCTGGATTTCAAGGGATTCCATGCACAAGAGGCTTGCCACTGTTGGCAAGAAGGCTTGGAGGAAGAAGAGAAAAATCAACTGAAAAATCAGTTCAATGCTATGTGTTTGTATGAGCTTGGTCGTCAACCAGCAAACACTAAGCTGTCAAGTAACAAGACAGTCAGGAGAGTTCTTGTTAGAGGTGGCAATGTGAAATGGAGGGTTTTGCGATTGGATACAGGAAACTATTCTTGGGGTAGTGAGGCTGTGACTCCCAAAACACGTATATTAGATGCGGTCTGCAATACCTCAAACAATGACCTTCATTATGGTGTTGATATTGGTAGAAAGAAGAAAGCAGCTGCTAAGAAGGATTCGGCAGAGGAGGGTGAAGCCACTGTTGAGGAGACAAAACATGGTAAGCATGTCTTGAGAAAACTGGAGAAGCGCCAAGAGGATCGTACACTCGATCCCCACATTGAAGAGCAGTTTGGCAGTGGTCGTTTACTAGCTTGCATTTCTTCTCGCCCAGGTCAATGTGGAAGAGCCGATGGTTACATATTGGAAGGCAAGGAGCTAGAATTTTACATGAAGAAAATTCAGAGGAAGAAGGGAAAGGGTGCTGCTTGA 2016 0.4097 MSHFSFSKQKTSDLSSLVFNFCFSVFSHPLYFSYFIFFSPYILKLVSFLSPLFITTTLLLLALFTVSPSYFVLDADDDSEFSESKLGFLLSNFQNLILWLHSKSNQKDEESGYLEEFEAYLVMFQASIFQALEAKPEENENSPQCLEEADDPVENNMSVSEVKSLESLFHESEDFEDLGHQKEAKAGGEMKVLENLFREDEEFEGLVLQKESKSADSEEVTKGKMESDTKMDDGEVEKKVLEESEEKKGRIIGMRSGFKVMNSKSQRLLEASLGSPENNWIYSESNHLGSFGSMRKEKEWRRTLACKLFEERHNNSSKFISNNNINGSESEGMDSLWETYETEPNKPKNNNDKKKKTTTKTVLEKSNTKKSTESKYYDLEDEDDEEEEEEEGIKLCCLQALKFSAGKMNLGMGKPNLMKISKAFKGIGWLHHHVSKHGKKGHILILTYKENSNHAVSRLLVIENVKFWLLDFKGFHAQEACHCWQEGLEEEEKNQLKNQFNAMCLYELGRQPANTKLSSNKTVRRVLVRGGNVKWRVLRLDTGNYSWGSEAVTPKTRILDAVCNTSNNDLHYGVDIGRKKKAAAKKDSAEEGEATVEETKHGKHVLRKLEKRQEDRTLDPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAA 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1682 671 MobiDBLite consensus disorder prediction 341 367 - -
Acco07g1682 671 Coils Coil 369 389 - -
Acco07g1682 671 MobiDBLite consensus disorder prediction 210 235 - -
Acco07g1682 671 FunFam 40S ribosomal protein S8 615 668 - -
Acco07g1682 671 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 FAMILY B PROTEIN 1 441 - -
Acco07g1682 671 CDD Ribosomal_S8e_like 506 650 - -
Acco07g1682 671 Gene3D - 507 666 - -
Acco07g1682 671 Pfam Ribosomal protein S8e 497 650 IPR022309 -
Acco07g1682 671 MobiDBLite consensus disorder prediction 345 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1682 Acco-ChrAcco07 33058775 33067135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1682 506 659 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 66.480 5.19e-68 219