Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1662 ATGGAAAACGAATTCTTCCTCAATGTCGCTTCCCTTCACTTCGAACCACCTTCTTCCTCTTCAATGCCTACGTGGCAGTCGATTTCATCCGCCATGGATGTTCAAGATCAAGCTCCCGTCCTCAATCGCGCTTCCGAGCAGCCCCAAGATTGCTTCTACAACAACGTCAAATGGGATAATAAGTCAGCGGATCATCACGGTCTTCAATTCGATTCTGCTCTGAGCTCGATGGTTTCTTCGCCGGCGGCGTCAAATTCCAATGTTATGCCCAACAATGAGAATTTCATGATCAGGGAATTGTTAGGGAAATTGGGGAACATTGGTGCGTCTCCTTACATAAATGGCGGAAATAGCACTGATACTTCGTGTTATAGCACTCCCTTGAGCTCGCCTCCGAAGATGAACATGATGAACCAGATGGTGAAAGAGAACTTGCCCAGTTTAGGGAAATCGATGGTTTTGAATTCTAATGTTTCAGAATTCTCATCTGATCCTGGTTTTGCAGAGAGAGCTGCCAAGTTTTCTTGCTTTGGAAGCAGGAGCTTCAATGGCAGAACATACCAACTAGGCATGAACAACGGTCAATTGTCTCTAAGATCTACTCCATCAATGGAAAATGAGAAGCTCGCCAGGGTTTCAAGTAGTCCCGCTCTGAAAGCACTTGGTGGATCTCAAACAGAAGTGGCGAATTCCCAAGAGGAATCAACAATCTCTGAGCAAAACCCAAATGGGGAAAATGGTGTGAATGTGAAATCAAGGAAGAGAAAAGCTTCTTCTTCCAAGGGAAACACCAGAGAAACTTCAACATCAACCAATCCTACTCCCAAGGCTAATGAAACTAACGAAGATTCAAATGCTAAGAAGTGCAGCAAGCCAAACGAGAGTGAAGGGAATGAAAATGGAAGTGTGAAGGTTGATGAGGAATCAAAAGGAGATGCTACTAGCAATAATGGAGTAGATGAGAAACAGACCAAGAGTAACTCATCAAAACCTCCTGAACCTCCAAAAGATTACATTCATGTCAGAGCAAGAAGAGGCCAAGCCACTGACAGCCACAGCCTTGCAGAAAGAGTCCGAAGGGAAAAGATCAGTGAGAGGATGAAGTTTCTCCAAGATCTTGTACCAGGTTGCAATAAGGTGACTGGTAAAGCACTTATGCTTGATGAAATCATAAACTATGTGCAGTCATTGCAGCGTCAAGTTGAGTTTTTATCTATGAAACTGGCTTCTGTCAACACCAGGCTGGACTTCAGCATTGAAAATCTAATCCCAAAAGATATGCTTCAATCAAGTAACTCTTTGGCACACCCATTATTCGCTCTAGATTCCTCAGCACAAGCCTTTTATGGGCAACACCCTCAGCAAAACCCAGGAATCCACAATAACATTCTTAATGGTGTTATGTCCCACAGCACGGTAGACCCATTAGAAACTGTCTCTCTGTGCCAAAACATGGGCATGCAATTACCTCCCCTTAATGGCTTTAATGAAGGTGGTTCTCTGTTTCCAGTAGCATTCTGTGAGGATGATGACCTTCACACCATTGTTCAAATGGGATTTGGCCAAATTGGAGCTGGAAAACCACCCAGTCATTCCCAGAACTTCAACGGTTCAAATCAAGTCACTCATCCGAAAGTTGAACCGTAA 1647 0.4396 MENEFFLNVASLHFEPPSSSSMPTWQSISSAMDVQDQAPVLNRASEQPQDCFYNNVKWDNKSADHHGLQFDSALSSMVSSPAASNSNVMPNNENFMIRELLGKLGNIGASPYINGGNSTDTSCYSTPLSSPPKMNMMNQMVKENLPSLGKSMVLNSNVSEFSSDPGFAERAAKFSCFGSRSFNGRTYQLGMNNGQLSLRSTPSMENEKLARVSSSPALKALGGSQTEVANSQEESTISEQNPNGENGVNVKSRKRKASSSKGNTRETSTSTNPTPKANETNEDSNAKKCSKPNESEGNENGSVKVDEESKGDATSNNGVDEKQTKSNSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIENLIPKDMLQSSNSLAHPLFALDSSAQAFYGQHPQQNPGIHNNILNGVMSHSTVDPLETVSLCQNMGMQLPPLNGFNEGGSLFPVAFCEDDDLHTIVQMGFGQIGAGKPPSHSQNFNGSNQVTHPKVEP 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1662 548 Gene3D - 344 420 IPR036638 GO:0046983
Acco07g1662 548 MobiDBLite consensus disorder prediction 212 338 - -
Acco07g1662 548 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 345 416 IPR036638 GO:0046983
Acco07g1662 548 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 347 397 IPR011598 GO:0046983
Acco07g1662 548 MobiDBLite consensus disorder prediction 527 548 - -
Acco07g1662 548 Coils Coil 394 414 - -
Acco07g1662 548 FunFam Basic helix-loop-helix transcription factor 344 416 - -
Acco07g1662 548 SMART finulus 353 403 IPR011598 GO:0046983
Acco07g1662 548 MobiDBLite consensus disorder prediction 281 315 - -
Acco07g1662 548 MobiDBLite consensus disorder prediction 218 248 - -
Acco07g1662 548 CDD bHLH_AtBPE_like 337 422 - -
Acco07g1662 548 Pfam Helix-loop-helix DNA-binding domain 351 398 IPR011598 GO:0046983
Acco07g1662 548 MobiDBLite consensus disorder prediction 262 280 - -
Acco07g1662 548 MobiDBLite consensus disorder prediction 526 548 - -
Acco07g1662 548 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 232 450 IPR024097 GO:0006355
Acco07g1662 548 MobiDBLite consensus disorder prediction 316 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1662 Acco-ChrAcco07 32727155 32729741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1662 1 513 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 45.507 1.82e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g1662 HLH 1.2e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0605 09 9043931 9046627 Acco07g1662 07 32727155 32729741 CCT