Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1653 ATGGCAGCCAGACATGCGTCAGGAATTTGTTTCAACTCTGAATCCCAAGATACCTCTACCAAAATCTGTACAGTTTTTGGGCCAAGCCGATGTTTCGAGAAGCCCTCTGCAATTCAGCAAAGAGGGATTGTTCCTTTCTGCAAAGGTCTTGATGTGATTCAGCAGGCGCAATCTGGAACTGGAAAAACCGCAACTTTTTGTTCTAGAATTTTGCAGCTGCTTGATTACAGCTTATTTGAATGCCAAGCACTGGTTCTTGCTCCTACTCGTGAACTTGCACAACAAATTGAGAAGGTCATGCGAGCGCTGGGGGACTATCTTGGCGTCAAGATTCCCGCGTCTCTTCGGCTCCGTCTTCTTGTCATCCTCATCTCCGCCTCCGGTCTCCGCCTCTCTCGCCGGCCTCTTCGTCCTCAGGAACCTCAGATCCCAACCTCACCCTCAATCCTTGACGATCATGACGATTTTCCCAACCTTACCCTAAAACCTAAATCCAAGCAATGGCAGGTCTGA 513 0.4893 MAARHASGICFNSESQDTSTKICTVFGPSRCFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSRILQLLDYSLFECQALVLAPTRELAQQIEKVMRALGDYLGVKIPASLRLRLLVILISASGLRLSRRPLRPQEPQIPTSPSILDDHDDFPNLTLKPKSKQWQV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1653 170 Gene3D - 14 162 IPR027417 -
Acco07g1653 170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 111 IPR027417 -
Acco07g1653 170 Pfam DEAD/DEAH box helicase 37 120 IPR011545 GO:0003676|GO:0005524
Acco07g1653 170 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 43 170 IPR014001 -
Acco07g1653 170 MobiDBLite consensus disorder prediction 135 156 - -
Acco07g1653 170 PANTHER RNA HELICASE 31 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1653 Acco-ChrAcco07 32551030 32555572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1653 32 113 Eukaryotic Initiation Factors Gene Family AT3G13920 90.244 5.61e-46 154