Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1619 ATGGCGCAACAAATCCCATATGGTGTGGTTACAAATCTCATCAACACTCTGGCTTCATTGGCCTTCAAAGAGATTGCTTCCATTTATGGGGTCAAGAGTGACATTGATTGGCTCAAGAACACTGTTGAAGACATCAAAGCTGTTCTTGCTGATGCTGATCACAAGCAGCACACTGAACAACTCGTCCAGATTTGGATCAGGCGCCTCAAACAAGTACTTTACCAAGCAGATGACTTGCTTGATGAATTGCGCACTCAAAATCTGTTGTGCAACAGGGATGCAAAAGATAACAAAGGAAAGGGAAAGGTACGTGAATTCTTCTCATCCTCCAACCCAATTTTTTCTCGCCACAAAATTGCTCGTAAGATTGGAAAGATTAGAGAGAAATTTAATGCTGTTGCCGAAACTATGTCCAAGTTGAATTTAGATCGAAGGGTAGTTGTTGAAATGAAGCATGAAAAGAGTAACTGGAGGGAAACTAGTTCTAAGCATGAAGAGAATATCATTGGTAGGGTGGAAAGTGAGAAGGAGATTATTGATCTATTGCTAAATACTAATAGCAATGAAAATGTTTCCTCGGTTGCTAGCAATGAAAATGTTTCCTTGGTTGCTAGCAATGCTAGCAATGAAAATGTTTCCTCGGTTGCTAGCAATGAAAATGTTTCCTTGGTTGCTATTGTGGGCATAGGTGGTTTGGGTAAAACTGCTCTTGCCCAGTTGGTCTACAATAATGCTCGAGTGAACAACTTTTTCGATAAGAAAATGTGGGTGTGCGTTTCGGAAAAGTTTGAAGTGAAACTACTTGTTAAAAAAATATTGGAATCATCAACTCGTGAGGAAGTAAGCGACCAACAATTGGATTTGCTTCAACATAAGCTTGAAGAGAATTTGAAAGGCCAAAAATATATCTTAGTCCTGGACGATGTGTGGAATGAGGATAGAGAAAAGTGGTTACATTTGAAAAAATATTTGATGTGTGGCGCTCAAGGTAGTAAGATTTTGTTGACTACCCGCCACCAAACAGTAGCCAATAAAATGGGTGTAAAAACGTTATATTTGTTGAAAGAACTAACAAATGACCAATCTTGGACTTTGTTGAGAAGTTTGGCATTTGATAATGATAAAATAATCACCCAAAACCTTGCGTCTATTGGTCAAAAGATTGCGGGAAAATGTGCTGGTGTTCCGCTAGCAATAAGAGTTATGGGAAGTTTGTTGCAATCAAAATCACGGGAAAGTGACTGGGAAGCTATCTTAGAAGGTGGCTTATGGAAATCATGTGAAGATAGTAATTCAATTATGCCAATTTTAAGGTTGAGTTATGACAATTTGGCAATTGAGTTAAAACAATGTTTTGCTTATTGTTCTTTATATCCAAAAGATTGGGAATATAGAAAGGATGAATTGATTGATTTGTGGATGGCAAACGGCTTCCTTGAATATGATGAGGAGAAACAATGTCCTGTAGACATTGGTGAAGAGTATCTTCATATTTTGTTGATGAAGTCATTCTTGCAAGATGTTCAAAGCGATGAACTAGGTGAAATAGAATCTTTTAAAATGCATGATTTAATGTATGACTTGTGCCAATTAATTGCTAGCTCTGATTACTACCTATATATTGAGGGGAGAAAAAATGTTGTGGGATGTCCTATACATGCTTTTTTTGAGGAATATAACTCTGATGGTTTACTAAATATACCGGATCCATGCCGATTGAGAACCTTTCTTGAAATGAAGGTAAAAGTTGATAGAAATCCAACGGATTTATTTAGGTTCAAACGCTTACGCAATATGATCACAAAGTTGATAAACCTGCGCCAACTTGATATAAATGGTTGCAAGGCCTTTGAAGATGGGATGCCGATTGGTTTGGGTAGGATGGCTACTCTACAACATTTGTCAACTTTTATAGTTGGTAATGATGATAGAAAGAAGGCCAAATTGAATGAACTGAAAGAACTTAATCTCAGAGATAGCAAAGTACCTAGGGGTGCACCTTCCCGATTGGCTTTTGTCATATACAAATCTTGTTGAGTTAATGATTCAGAACTGTGGAAAGCTGAGGGGATGGGTAAGGGAGGAGAATGTCCAAAATACAAGAGACAACGAGTGGCATCATTCACTATCTTCATTTTCTCGCCTTTCATCATTACAAATTAA 2163 0.3773 MAQQIPYGVVTNLINTLASLAFKEIASIYGVKSDIDWLKNTVEDIKAVLADADHKQHTEQLVQIWIRRLKQVLYQADDLLDELRTQNLLCNRDAKDNKGKGKVREFFSSSNPIFSRHKIARKIGKIREKFNAVAETMSKLNLDRRVVVEMKHEKSNWRETSSKHEENIIGRVESEKEIIDLLLNTNSNENVSSVASNENVSLVASNASNENVSSVASNENVSLVAIVGIGGLGKTALAQLVYNNARVNNFFDKKMWVCVSEKFEVKLLVKKILESSTREEVSDQQLDLLQHKLEENLKGQKYILVLDDVWNEDREKWLHLKKYLMCGAQGSKILLTTRHQTVANKMGVKTLYLLKELTNDQSWTLLRSLAFDNDKIITQNLASIGQKIAGKCAGVPLAIRVMGSLLQSKSRESDWEAILEGGLWKSCEDSNSIMPILRLSYDNLAIELKQCFAYCSLYPKDWEYRKDELIDLWMANGFLEYDEEKQCPVDIGEEYLHILLMKSFLQDVQSDELGEIESFKMHDLMYDLCQLIASSDYYLYIEGRKNVVGCPIHAFFEEYNSDGLLNIPDPCRLRTFLEMKVKVDRNPTDLFRFKRLRNMITKLINLRQLDINGCKAFEDGMPIGLGRMATLQHLSTFIVGNDDRKKAKLNELKELNLRDSKVPRGAPSRLAFVIYKSCXVNDSELWKAEGMGKGGECPKYKRQRVASFTIFIFSPFIITN 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1619 720 FunFam Probable disease resistance protein At1g61300 185 350 - -
Acco07g1619 720 Pfam Rx N-terminal domain 9 96 IPR041118 -
Acco07g1619 720 CDD RX-CC_like 7 129 IPR038005 -
Acco07g1619 720 Gene3D - 149 351 IPR027417 -
Acco07g1619 720 Gene3D - 356 440 IPR042197 -
Acco07g1619 720 FunFam Probable disease resistance protein At1g63360 441 531 - -
Acco07g1619 720 Coils Coil 66 86 - -
Acco07g1619 720 Pfam NB-ARC domain 218 443 IPR002182 GO:0043531
Acco07g1619 720 Gene3D - 441 531 IPR036388 -
Acco07g1619 720 Gene3D - 9 123 - -
Acco07g1619 720 PANTHER DISEASE RESISTANCE PROTEIN RP 46 661 IPR044974 GO:0006952
Acco07g1619 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 455 IPR027417 -
Acco07g1619 720 PRINTS Disease resistance protein signature 392 406 - -
Acco07g1619 720 PRINTS Disease resistance protein signature 296 310 - -
Acco07g1619 720 PRINTS Disease resistance protein signature 223 238 - -
Acco07g1619 720 PRINTS Disease resistance protein signature 601 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1619 Acco-ChrAcco07 32104832 32107538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1619 220 452 WRKY Transcription Factor Family AT5G45050 26.033 1.80e-07 52.8