Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1601 ATGCCTTCTTTCTCTACCTTTACTTCTGCTTGGACATATGACGTGTTCTTGAATTTTAGAGGCGAAGACACTCGTCTTGATTTCACTCCTTATCTTTATGACGCTTTAGGCCGGGTAGGAACCCTTGTTTTCATGGACGATTCAGCAATTGAAAGGGGAGAAGATATCTCATCCTCATTATTGCATGCAATTCAAAGATCACGGATTGCGATCATAGTTTTTTCTGAAGACTATGCTTCTTCGAGATGGTGTTTGGATGAACTGCTGCAAATAATGGAGTGTCGAAGAATTCAAGCTCAAGTGGTTCTACCCATATTCTATAATGTATCTCCGTCTGATGTTCGTCATCAGAGAGGCAGTTATGGCGAAGCAATGGAACGACACGAGCAAAGTTTGGGAAGGGGAAGTGATCGGGTGTTGCGGTGGAGGCAAGCACTCAAGGCAGCTGCCAACCTTGCCGGTCTCATCTATGAAGCATCTGAGCCTGAAATGGTGCTAATTGAGCGTATTGTTGCAGTTGTTTCAAAAGAATTAGATGCTGGACAAATGTTTATTGCTGACCATCCAGTGGGAATACAGTCACGAGTTCTTGAATTGACGAATAAATTGTCAAATAAGAGATTCGAAAAAGCTCTAATCATAGGCCTCTGGGGGATGGGAGGCGTTGGCAAAACAACTATTGCCAAAGCCATTTACAATGAAATTGGTCGTCAATTTAGAGCAAGAAGTTTCCTTGCAAATATAAGAGAAAACTCAAAACATAAGGGCCAAGTTAATTTGCAAAAGCAACTCATTTCTGATATCACTAAAACAAAAGTTTTCAAGATACCTAACATTGATAGAGGGAAAAAAATAATGCAGGAAAGATTCCCCAACATAGAGGCATTAGTTGTATTGGATGATGTGGATAGTGTGAATCAACTAAACACATTATGTGGAAGTCATGAATGGTTTTGTCCAGGAAGTGTAATAATCATTACAACTAGAGATCTACATTTACTTGATGTCCTTAAAGCTGACCATAAGTATAGAATTAGAGAAATGAGTGAAACAGAATCTCTTCAGCTTTTGAGTTGGCATGCCTTTAAGCAAGCAGCTCCTTTTGAAAACTTCATAAATCTTTCTAAAAATGTAGTTGCTTACTGTGGTGGACTTCCATTGGCTATTCAGATCCTTGGTTCTTGTTTGCATGGGAGAACAATTGAAGCATGGGAGGATGTGTTGTCCAAACTACAAAGGATTCCTAATAAAGATATACATACAAAGTTAAAAATAAGCTATGATGGATTGAATGATCATACAGAGAAGGATATTTTTCTTGACATATGTTGCTTCTTTATCAATAAGGACAAGAACTATGTTACACAGATATTAGATGGTTGTGGCCTTCATGCAAAAACTGGACTTCAAACCCTCATAGAGCGGAGCCTTGTAAAAATTAGTAAGGATAATAAGCTTGAAATGCATGATTTATTGCAAGAGATGGGGAAAGAAATCATTCGTGAAAGTCCACCAAAAGATCATGGGGAATGTAGCAGATTATGGTTTCATGAAGATGTGCTTGATGTGTTAACAGAACATACCGGAACCAAAGCTATTGAGGGTATATCTCTGAAGGTGCAAGGAACCCATAGAGAGCATCTCATTGATTCTGAGGCATTTAAGGAGATGAAGAAACTTAGATTGCTCCAACTAGATTTTGTGAATCTCAAAGGAGATTATAAACATCTTTCCAAAAAGCTGAGGTGGCTTTGTTGGCAAGGATTTCCTCTAAAATACACTCCAAACAACTTCTACCAAAAGGAATTAGTTGCTATTGACTTCAAATATAGCAACCTCAAAGTAGTTTGGAAAGATCCCCCGCTGCTAGAGATGTTGAAGACACTTAATCTCAGTCATTCATCTTACTTGACACAGACCCCCGATTTTACAAAATTACCAAACCTGGAGACGCTAGTGCTGAAAGATTGTCCAAGCTTGATGTTTGTTCACCAGAGCATTGGAGATCTGAAAAGAATTCATTTGGTAAATTTTAAAAACTGCAAGTTCCTGAGCGCTCTTCCTAGAAGCATGTACAAGTTGAAATCATTAAATACTCTCATTCTTTCTGGTTGTTCATTGATTGACCATTTAGAAGAAGATATTGAGCAGATGGAATCCATGACAGTACTAAAGGCGGATAATACTGCCATAACAACAATACCCAAGTCATTAGCAAGATTGGGAGGGCTTAAGCATGGATATGTATCTTTCCCAGGCCTTGAAGGAAGAGCACAAGATATATTCCCTTCTCTCATATGGTCTTGGATGTCACCCTCTAATATTCACCAGTCCAGTGGTGAATCATTTTTCTTGAGTATATCATCTCTAGCTTTCTCAGTTGCACAGAATGGCACCTTTCACGGCCTATCTCCATTTTTTGGTAACCTTGCCAAGCTTCGAGGCATGTGGGAAGAGTGTCGATCACATTTTCAATTTCATGGAACAATGGCTAGACTTTTGGATGGCTTGTATGAGACAAATTTTATGGAGTTGGAATCAACTCGAGATACCCCACAGATCTCATATATGGAAGCTTCTGCGTCTTGTGAGAGACATGAACAACTTCGCATTGCAAGGCCAACAGACTCTTTCAATTCTCTTTTACTTCAAATGGGAGTATGTAGCAAAGCATACTTGTTGCAAGAGAAAATTTCACAGGGATGGAATTATGGTGGTTGTGATGATTCTCACCTACCTGGTGATCAGTATCCTGACTGGTTCATGTACAAGGGCGAGGGACGCTCAGTAATTTTGAAGGTGCCTCAAGTCATAGGTTGTCACGTGAAGGCAATGCTTTTGAATGTAGTGTATTCTTCTTGCATGGATAACAAAACTCCTCAATTTCTCATAAATGTTCTGATCATTAACTACACGAAGGGTGATGTTAAAGAGCATAGAGGAGACTGGCAAACTTTCCATGAAGATGCAGAATGGCAGAGTATCATTTCAAGTGTTCAACCTGGTGATCTTATGGAGGTTGTTTTGAGTATTGGGCCTCAATTGGTTGTGAATAAGATTGCAGCATACTTGATTTATGATGTTTCAAGTGAATTAATTGTTCCATAG 3108 0.3916 MPSFSTFTSAWTYDVFLNFRGEDTRLDFTPYLYDALGRVGTLVFMDDSAIERGEDISSSLLHAIQRSRIAIIVFSEDYASSRWCLDELLQIMECRRIQAQVVLPIFYNVSPSDVRHQRGSYGEAMERHEQSLGRGSDRVLRWRQALKAAANLAGLIYEASEPEMVLIERIVAVVSKELDAGQMFIADHPVGIQSRVLELTNKLSNKRFEKALIIGLWGMGGVGKTTIAKAIYNEIGRQFRARSFLANIRENSKHKGQVNLQKQLISDITKTKVFKIPNIDRGKKIMQERFPNIEALVVLDDVDSVNQLNTLCGSHEWFCPGSVIIITTRDLHLLDVLKADHKYRIREMSETESLQLLSWHAFKQAAPFENFINLSKNVVAYCGGLPLAIQILGSCLHGRTIEAWEDVLSKLQRIPNKDIHTKLKISYDGLNDHTEKDIFLDICCFFINKDKNYVTQILDGCGLHAKTGLQTLIERSLVKISKDNKLEMHDLLQEMGKEIIRESPPKDHGECSRLWFHEDVLDVLTEHTGTKAIEGISLKVQGTHREHLIDSEAFKEMKKLRLLQLDFVNLKGDYKHLSKKLRWLCWQGFPLKYTPNNFYQKELVAIDFKYSNLKVVWKDPPLLEMLKTLNLSHSSYLTQTPDFTKLPNLETLVLKDCPSLMFVHQSIGDLKRIHLVNFKNCKFLSALPRSMYKLKSLNTLILSGCSLIDHLEEDIEQMESMTVLKADNTAITTIPKSLARLGGLKHGYVSFPGLEGRAQDIFPSLIWSWMSPSNIHQSSGESFFLSISSLAFSVAQNGTFHGLSPFFGNLAKLRGMWEECRSHFQFHGTMARLLDGLYETNFMELESTRDTPQISYMEASASCERHEQLRIARPTDSFNSLLLQMGVCSKAYLLQEKISQGWNYGGCDDSHLPGDQYPDWFMYKGEGRSVILKVPQVIGCHVKAMLLNVVYSSCMDNKTPQFLINVLIINYTKGDVKEHRGDWQTFHEDAEWQSIISSVQPGDLMEVVLSIGPQLVVNKIAAYLIYDVSSELIVP 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1601 1035 SUPERFAMILY L domain-like 502 814 - -
Acco07g1601 1035 SMART till_3 12 152 IPR000157 GO:0007165
Acco07g1601 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 442 IPR027417 -
Acco07g1601 1035 PRINTS Disease resistance protein signature 382 396 - -
Acco07g1601 1035 PRINTS Disease resistance protein signature 692 708 - -
Acco07g1601 1035 PRINTS Disease resistance protein signature 213 228 - -
Acco07g1601 1035 PRINTS Disease resistance protein signature 289 303 - -
Acco07g1601 1035 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 837 IPR044974 GO:0006952
Acco07g1601 1035 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
Acco07g1601 1035 Gene3D - 177 343 IPR027417 -
Acco07g1601 1035 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 180 - -
Acco07g1601 1035 Pfam NB-ARC domain 195 424 IPR002182 GO:0043531
Acco07g1601 1035 Gene3D - 347 431 IPR042197 -
Acco07g1601 1035 Gene3D - 6 176 IPR035897 -
Acco07g1601 1035 Gene3D Ribonuclease Inhibitor 529 826 IPR032675 -
Acco07g1601 1035 Pfam TIR domain 13 178 IPR000157 GO:0007165
Acco07g1601 1035 ProSiteProfiles TIR domain profile. 11 178 IPR000157 GO:0007165
Acco07g1601 1035 SMART AAA_5 210 337 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1601 Acco-ChrAcco07 31844368 31851401 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1601 623 744 WRKY Transcription Factor Family AT4G12020 32.787 3.38e-09 59.3