Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1584 ATGGTTCTGAGTAGCCGAACTGTCTGTGCTCATGTTATTATTATTAATTTCTTGTTGCTTCTTAGTTGTAACATGGTCTATGGGACTCCCACTGACATCTTCTGCTTGAAAAGCATAAAAAGTTATCTTCAAGATCCATATGGTTATTTGAATTCTTCTTGGAATTTCAACAACAAAACAGAAGGATTTATCTGTAGATTTACTGGTGTTGAATGTTGGCACCCTGATGAGAACAAAGTCTTAAATCTTAAGTTGTCAAATATGGAACTCAAGGGCCAGTTTCCTCGTGCCATTCAAAACTGCTCCAGCTTAACAGGGTTGGATCTATCATTTAACAAACTTTCTGGAAAAATCCCAGCAGATATCAATAATATCCTTAACTATGTGACAACTCTTGATCTATCTTCAAATGACTTTTCTGGGACGATCCCTGAGGGTCTTGCAAATTGTTCTTATCTCAATTCCCTTAAACTGGATTCAAATCAACTCGCCGGGCAAATTCCTGGACGATTCAGCACACTTACAAGGCTCAAAATATTTACTGTCACAAACAATCTTTTGACCGGGCAAATTCCGAACCTTCCGAATATCTCAGCTGAGAGCTATGCTAATAATCCTGGACTATGTGGTAATCCTTTGCCAGTCTGCCAGGCCCCACCCTCCAAGAGTAACTCTGCAGTTATAGCTGGAGCAGCGGTTGGTGGGGTGACGGTTGGAGCATTAGCAATAGGCATTGGATTGTTCTTCTTTGTCAGACGAGTATCTGTGATTAAGAAGGAAGAAGACCCTGAAGGCAACAAATGGGCGAGAAGTCTAAAGGGAACTAAAGGAATAAAGGTTTCAATGTTTGAGAAGTCAGTTTCAAAAATGAAATTAAGTGATCTCATGAAGGCTACTAACAACTTCAGTAAAAGTAATATTATCGGGTCTGGAAGAACAGGAACCATGTACAAAGCTGCCCTTGATGATGGCACATCACTCATGGTCAAGAGATTGCAGGAATCTCAGCACTCTGAGAAAGAATTTCTGTCTGAGATGTCTACCCTCGGGGCTGTCAGACACCGTAACTTGGTTCCTCTTTTAGGTTTTTGTGTGGCCAAGAAGGAGAGGCTTGTGGTCTATAGTTTTATGTCTAATGGCACTCTTCATAATCAGCTACATCCTGCAGAAGGTCAGAGCACCCTGGAATGGCCTATAAGGCTTAAAATTGCTATTGGAGCTGCCAAAGGATTAGCATGGCTCCATCATAGCTGCAATCCCCGTATCCTCCATCGTAACATAAGCTCTAAGAGCATCTTATTGGATTCTGATTTTGAGCCAAAAATTTCTGATTTTGGCCTTGCTAGACTAATGAACCCAGTTGATACACATTTGAGTACTTTTGTGAATGGAGAGTTTGGGGATTTAGGTTATGTTGCTCCTGAGTACGCAAGAACGCTGGTGGCTACCCCTAAGGGAGATGTTTATAGCTTCGGGGTTGTTCTTCTTGAGTTGGTGACTGGTGAAAAACCCACCCATGTGGCTAAAGCTCCAGAAACATTTAAGGGAAGTTTAGTCGAATGGATCACCGAACTCTCAAGCACCTCTGAACTGCAGAAAGCCATTGATGAATCATTAGTTGGGAATGAATTTGATAATGAGCTTTTCCAATTTCTTAAGGTTGCATGCAACTGTGTTTCATCAACTCCAAAGGAAAGGCCATCTTTGTTTGAAGTTTACCAGTTTTTAAGAGCCATTGGGAGTAGGTACAATTTCACAACTGAGGATGAGATGCTGGTACCTGTAGATATTGATAATGCTGGAAATCTAGACGAACTTATTGTGGCTCGAGAAGGGAATAACTGA 1845 0.413 MVLSSRTVCAHVIIINFLLLLSCNMVYGTPTDIFCLKSIKSYLQDPYGYLNSSWNFNNKTEGFICRFTGVECWHPDENKVLNLKLSNMELKGQFPRAIQNCSSLTGLDLSFNKLSGKIPADINNILNYVTTLDLSSNDFSGTIPEGLANCSYLNSLKLDSNQLAGQIPGRFSTLTRLKIFTVTNNLLTGQIPNLPNISAESYANNPGLCGNPLPVCQAPPSKSNSAVIAGAAVGGVTVGALAIGIGLFFFVRRVSVIKKEEDPEGNKWARSLKGTKGIKVSMFEKSVSKMKLSDLMKATNNFSKSNIIGSGRTGTMYKAALDDGTSLMVKRLQESQHSEKEFLSEMSTLGAVRHRNLVPLLGFCVAKKERLVVYSFMSNGTLHNQLHPAEGQSTLEWPIRLKIAIGAAKGLAWLHHSCNPRILHRNISSKSILLDSDFEPKISDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGVVLLELVTGEKPTHVAKAPETFKGSLVEWITELSSTSELQKAIDESLVGNEFDNELFQFLKVACNCVSSTPKERPSLFEVYQFLRAIGSRYNFTTEDEMLVPVDIDNAGNLDELIVAREGNN 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1584 614 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 21 193 - -
Acco07g1584 614 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 263 376 - -
Acco07g1584 614 Gene3D Phosphorylase Kinase; domain 1 263 376 - -
Acco07g1584 614 ProSiteProfiles Protein kinase domain profile. 302 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g1584 614 CDD STKc_IRAK 308 576 - -
Acco07g1584 614 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Acco07g1584 614 SUPERFAMILY L domain-like 30 210 - -
Acco07g1584 614 FunFam Nuclear pore complex protein NUP107 30 193 - -
Acco07g1584 614 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Acco07g1584 614 FunFam Leucine-rich repeat receptor-like protein kinase 377 587 - -
Acco07g1584 614 Pfam Protein tyrosine and serine/threonine kinase 305 575 IPR001245 GO:0004672|GO:0006468
Acco07g1584 614 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Acco07g1584 614 Gene3D Ribonuclease Inhibitor 31 217 IPR032675 -
Acco07g1584 614 Gene3D Transferase(Phosphotransferase) domain 1 377 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1584 Acco-ChrAcco07 31078747 31081054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1584 12 590 Receptor kinase-like Gene Family AT3G28450 47.619 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Acco07g1584 PK_Tyr_Ser-Thr 1.4e-39 CL0016