Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1582 ATGACCTCTTTTCTGAAACCTGAGAATGCTCTAAAAAGAGCAGAAGAATTGATCAATGTGGGACAGAAGCAAGACGCTTTGCAAACTCTGCATGGCCTTATCACTTCAAAAAGATATAGGGCATGGCAGAAGACACTTGAAAGGATAATGTTTAAATATGTAGAACTGTGTGTAGACATGCGGAAAGGGCGATTTGCAAAGGATGGGCTGATTCAGTATCGAATTATATGTCAGCAAGTTAATGTTAGCTCTCTGGAGGAGGTCATCAAACATTTCATGCATCTGTCAACTGAGAAAGCTGAGCAAGCTCGAAGCCAGGCTCAGGCACTAGAGGAGGCTCTTGATGTTGATGATTTAGAGGCTGATAAAAGGCCTGAAGACTTGATGCTAAGCTATGTGAGTGGAGAGAAGGGAAAAGACAGATCTGACAGGGAGGTTGTTACTCCGTGGTTTAAGTTTCTTTGGGAAACGTACAGGACTGTGCTTGAGATATTACGGAACAATTCAAAACTTGAAGCTCTATATGCTATGACGGCGCATCGGGCTTTTCAATTTTGCAAGCAATATAAGCGAACAACTGAGTTTCGTAGGCTTTGTGAAATTATAAGAAACCACCTAGCCAATCTTAATAAATATCGAGACCAACGGGACCGACCTGATCTTTCAGCACCTGAAAGCATGCAACTATATCTAGACACCAGATTTGAGCAACTGAAAGTCGCCACTGAACTTGAACTCTGGCAGGAAGCTTTTAGATCCATTGAAGATATACATGGACTAATGTGCATTGTCAAGAAAACACCCAAGGCATCTTTGATGGTTCTTTACTATGCCAAACTTACAGAAATATTTTGGATATCATCAAGCCATCTTTATCATGCATATGCATGGTTCAGGCTCTTTTTGCTGCAGAAGAGCTTCAATAAGAATCTGAGCCAGAAGGATTTGCAATTGATAGCTTCATCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCCCATGATCACACTCAAGGTGCATCTCATTTGGAATTGGAGCATGAAAAAGAGAGGAATTTGAGGATGGCTAATCTCATTGGTTTTAACCTTGAAAGTAAACCTGATGGCAGAGAAGTGCTTTCAAGGTCAGCCCTTCTTGCTGAACTGGTGTCCAAGGGTGTAATGTCTTGTGCAACTCAGGAAGTGAAGGACATTTATCATCAACTGGAACATGAATTTCTTCCCCTAGACCTTCCTTTGAAAGTTCAGCCTCTGCTAACCAAAATATCTAAGTTAGGGGGTAAGCTCTCCTCTGCTTCTTCTGTACCTGAGGTGCAGCTGTCTCAGTATGTCCCAGCACTGGAGAAACTAGCTACCTTGAGGTTGCTACAACAGGTGTCCAACATATACCAGACAATGAAGATTGGGACCTTATCTAGAATGATCCCCTTTTTTGATTTTTCTGTTGTGGAAAAGATTTCTGTGGATGCAGCTAAGCATAACTTTGTATCCATGAAAGTTGACCACATGAAGAGTGTTGTAGTTTTCTGCAAGAAGAGTCTTGAGTCTGATGGCTTAAGGGATTCCTTGGCTAGTCTTGCTGAATATCTGAATAAGCCAAGACTTGTGATTTATCCTCCTGATAGCAAGCCATCAAATCTTGAATCTTGGCTATCCAATTTGATTGAGGCTGTAACCAAGGAACACAAGAGGCTTCTTGCACGGAAATCAATTATTGAGAAGCGAAAAGAAGAACAAGAGCGACAGCTTCTTGAAATGGAAAGAGAGGAGGAATCAAAAAGATTGAGACTGCAGAAAATAACTGAAGAAGCAGAACAAAGACGACTTGCCAATGAGTATGAGCAGAGGAAGAACCAGAGAATTCTCAGAGAAATAGAAGAAAGAGAAATGGAAGAAGCTCAAGCATTGCTTCAGGAAGCTGAGAAGCGGATTAAAAAGAAGGGAAAGAAGCCAATCATAGAGGGTGAAAAAATGACCAAGCAAACACTGATGGAGTTGACTTTGACTGAACAACTCCGGGAAAGACAAGAAATGGAGAAGAAACTACAAAAACTGGCTAAAACAATGGACTACTTGGAAAGAGCCAAAAGAGAGGAGGCTGCTCCCTTGATTGAAGCCGCGTATCAAAAGCGCCTTGTTGAAGAAAAGCTTCTTCATGAGCGTGAGCAACAGCTTGAGATTGAAGTTAGCAAACAGTGCCATGAGGGAGATCTCAAGGAGAAAGAAAGACTGGCTCGTATGGTTGGCAATAAGGAGATTTATCAAGAGAGGGTTGTCAGTCGTCGTCAGGAAGAATTTAATAGATTGAGGCAGGAAAGAGAGGAACGAATCTCTAGGATTTTACAGTCCAGGAGACAAGAGAGGGAAAAGATGAGGAAGTTGAAGTATTATCTGAGGTTAGAAGAAGAGAGACAGCAAAAATTGAGGGAAGAAGAGGAAGCTAGGAAGCGTGAAGAGGCCGAGAGGCGGAAGAAGGAAGAGGCTGAGCGCCTGGCGAAATTGGCCGAGATAGCTGAAAAGCAGAGACAAAGAGAGAGGGAACTTGAAGAGAAGGCAGAGAGGCAGAAGAAAGAAGCACTTTTTGGCAGAGGTGGTGAAGCCGCTGTGAAGCCTCTTGAACCTTCAGCCCGCACATTGGAGGCTGGATCTGCTGCTCCTGCTGCAGCAGCAGCAGCCGCTGCTGCACCAAGCCCTGGGAAATACGTACCTAAGTTCCGGCGTGAGAGAACTGAAGGCCCAGCTCCTGCTGCTCCTCCAGAAACTGACCGATGGACAAACCCCAGCAGGCAGGATGGTGGTGACAGATGGCGTAGTGATGATCGAAGACCCGCTTTCAGTACTGGCGGGGGTTTGAGGTCGTCATCAACATGGTCCTCATCCAGGCGTGATCGTTGA 2892 0.4412 MTSFLKPENALKRAEELINVGQKQDALQTLHGLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDREVVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESMQLYLDTRFEQLKVATELELWQEAFRSIEDIHGLMCIVKKTPKASLMVLYYAKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHTQGASHLELEHEKERNLRMANLIGFNLESKPDGREVLSRSALLAELVSKGVMSCATQEVKDIYHQLEHEFLPLDLPLKVQPLLTKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSNIYQTMKIGTLSRMIPFFDFSVVEKISVDAAKHNFVSMKVDHMKSVVVFCKKSLESDGLRDSLASLAEYLNKPRLVIYPPDSKPSNLESWLSNLIEAVTKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLANEYEQRKNQRILREIEEREMEEAQALLQEAEKRIKKKGKKPIIEGEKMTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQKRLVEEKLLHEREQQLEIEVSKQCHEGDLKEKERLARMVGNKEIYQERVVSRRQEEFNRLRQEREERISRILQSRRQEREKMRKLKYYLRLEEERQQKLREEEEARKREEAERRKKEEAERLAKLAEIAEKQRQRERELEEKAERQKKEALFGRGGEAAVKPLEPSARTLEAGSAAPAAAAAAAAAPSPGKYVPKFRRERTEGPAPAAPPETDRWTNPSRQDGGDRWRSDDRRPAFSTGGGLRSSSTWSSSRRDR 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1582 963 Coils Coil 615 649 - -
Acco07g1582 963 Coils Coil 796 857 - -
Acco07g1582 963 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Acco07g1582 963 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Acco07g1582 963 Pfam PCI domain 373 508 IPR000717 -
Acco07g1582 963 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Acco07g1582 963 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 936 IPR027512 GO:0005852
Acco07g1582 963 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 525 IPR000717 -
Acco07g1582 963 Gene3D - 268 342 - -
Acco07g1582 963 Gene3D - 362 493 - -
Acco07g1582 963 MobiDBLite consensus disorder prediction 926 941 - -
Acco07g1582 963 Gene3D UVR domain 217 267 - -
Acco07g1582 963 Coils Coil 561 602 - -
Acco07g1582 963 MobiDBLite consensus disorder prediction 804 963 - -
Acco07g1582 963 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Acco07g1582 963 MobiDBLite consensus disorder prediction 804 862 - -
Acco07g1582 963 Coils Coil 93 120 - -
Acco07g1582 963 Coils Coil 667 697 - -
Acco07g1582 963 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 952 IPR027512 GO:0005852
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1582 1 960 Eukaryotic Initiation Factors Gene Family AT4G11420 73.077 0.0 1312