Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1562 ATGGCTTCACAATTCCTAAGAAGACATAAAAGGAAGACTTCATTCTTCAAAGTCCTGATCAATGATTTCGCTACTCGCTTGCAAATCCCACCATCTTTTAACAAGGAGTTTGGGAAAGACGGCGTGCCAAAGAGAACGACACTTGAGACTTGTAGTTGTAAATATTGGGAAGTTGGGGTGGAAAAGCTGGGAAACAAATTTTATTTTAATAATGGCTGGTATAAATTTGTGCAAGATAATAGTCTGGAAAATGGAGATTTCTTGGTGTTAAAGTATTTTGCAGATTATTCAAAGTTCAAGGTAAAAATCTATGGAAAAACTTGCTGTGAGAAGCAACTGAACTTGGTTACTGGGGAGAGATGTTGTGAACCTCTTAGTGGTAAACAAGTCCAGAGGAATGAACAAGCACGAAGAAAAAGAGAGAGGCGCAATGAAGAAAATGATGCTAATGTCAACAAAGATCGAGAATCCAGAGATTTGAAAAGCGACGTCATTAATCTTGAATCTGATGGCTCTTACTCATCTTTTGATGATGACGATGATGATGAACAAGAAATTGGTAAGCTTCAAAATGCGTCAAGAATCGAGTTCGAATCTGAATATAAGTATTTTCATCGCAAACTCAAGTATTCAAGTGCCAACAGTTATCTGTATATACCCACAGATTTTTTCGAGGAACATATGAAGGAAAACCAAAGAATCAAGTTAGAGGTATCTGAGAAAACATGGAAAATGGAGATTGATGTGTACGGAAATAAACGACGTAAGAAACGAAGAAAGCAAGCCAGAGTGACTAACGGATGGAAGAGATTAGTGCAAGAACATCATTTGAAAATGGGCGATATCTGCGTCTTTGAAATGATTAATAAATGTGATGATTCTGATGATTCTGTGTTTCATGTTCATGTTTATAGGTGGGATCATCGGAAAGCAGAGTTTTCCCAGATATTTTAG 954 0.37 MASQFLRRHKRKTSFFKVLINDFATRLQIPPSFNKEFGKDGVPKRTTLETCSCKYWEVGVEKLGNKFYFNNGWYKFVQDNSLENGDFLVLKYFADYSKFKVKIYGKTCCEKQLNLVTGERCCEPLSGKQVQRNEQARRKRERRNEENDANVNKDRESRDLKSDVINLESDGSYSSFDDDDDDEQEIGKLQNASRIEFESEYKYFHRKLKYSSANSYLYIPTDFFEEHMKENQRIKLEVSEKTWKMEIDVYGNKRRKKRRKQARVTNGWKRLVQEHHLKMGDICVFEMINKCDDSDDSVFHVHVYRWDHRKAEFSQIF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1562 317 SMART B3_2 15 107 IPR003340 GO:0003677
Acco07g1562 317 SMART B3_2 204 307 IPR003340 GO:0003677
Acco07g1562 317 SUPERFAMILY DNA-binding pseudobarrel domain 197 307 IPR015300 -
Acco07g1562 317 ProSiteProfiles B3 DNA-binding domain profile. 12 107 IPR003340 GO:0003677
Acco07g1562 317 MobiDBLite consensus disorder prediction 132 157 - -
Acco07g1562 317 Pfam B3 DNA binding domain 15 104 IPR003340 GO:0003677
Acco07g1562 317 Pfam B3 DNA binding domain 209 290 IPR003340 GO:0003677
Acco07g1562 317 PANTHER B3 DOMAIN-CONTAINING 11 299 - -
Acco07g1562 317 CDD B3_DNA 14 104 IPR003340 GO:0003677
Acco07g1562 317 Gene3D - 182 308 IPR015300 -
Acco07g1562 317 CDD B3_DNA 202 305 IPR003340 GO:0003677
Acco07g1562 317 Gene3D - 7 109 IPR015300 -
Acco07g1562 317 SUPERFAMILY DNA-binding pseudobarrel domain 12 113 IPR015300 -
Acco07g1562 317 ProSiteProfiles B3 DNA-binding domain profile. 202 307 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1562 Acco-ChrAcco07 30433122 30434558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1562 7 292 REM Transcription Factor Family AT5G09780 26.603 3.88e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Acco07g1562 B3 7.6e-14 CL0405