Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1543 ATGAGGCACCGAAACTCTGCTCCTCGTGTAAAGTGTAAAGCCGTAAACCCTCTTTCTCTGCCTTCTGCTTCCCTTCTTTCCCTCTCTTTCTCTCAAATTCCAAGACTCATTGCATTACAGTTACCTGAGGAAGTGAATCTTGAAACAGAGGATGGCAATTCTTGGCTGGTTTCTGTGAAAGAACGCAATGGCACCTTTTATTTTAGCAAAGGTTGGCATTGCTTTGTGAGGCAGAATCTTTTGAAGACTAACGATCTGGTGAAATTTCAATTAACTCCAAATGATGCATCTAGAATAATGGTATCAATATTTGATAGCGATAGGCTCTACAATATGTAA 339 0.4012 MRHRNSAPRVKCKAVNPLSLPSASLLSLSFSQIPRLIALQLPEEVNLETEDGNSWLVSVKERNGTFYFSKGWHCFVRQNLLKTNDLVKFQLTPNDASRIMVSIFDSDRLYNM 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1543 112 SMART B3_2 14 107 IPR003340 GO:0003677
Acco07g1543 112 SUPERFAMILY DNA-binding pseudobarrel domain 35 106 IPR015300 -
Acco07g1543 112 CDD B3_DNA 35 105 IPR003340 GO:0003677
Acco07g1543 112 PANTHER B3 DOMAIN-CONTAINING 41 107 - -
Acco07g1543 112 Gene3D - 15 108 IPR015300 -
Acco07g1543 112 Pfam B3 DNA binding domain 40 106 IPR003340 GO:0003677
Acco07g1543 112 ProSiteProfiles B3 DNA-binding domain profile. 16 107 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1543 38 100 REM Transcription Factor Family AT2G24680 34.375 1.67e-06 43.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Acco07g1543 B3 7.7e-14 CL0405