Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1535 ATGTCTTCGTCTCCAAACGCATCGTGTCGCCATGACCCTTCTGAAACAAACCTCTCCTCCAAATCTCACGTGATATCACGTGACACTATACCTTCTTCCTCAAAGGCTTCAGCTTCTTCATCATCTTCAAACACCACTGTCAGTAAAGTTAAACTCAGAAACAAAGACATTGATCATGATCAGATAAACAACAACCACGAGCCGTCCTCTCCGTATTACAAGGGTCTTCTTTACCAACCTATCTCTATCAACACCGAACATAATTCGCAGAATCATCATCATCATCATCCCAGTGGTAGCCATAATAGTAGTAATTCTAGGGCTCCGACCACGACGCCGACTTCTTCTGAATCTAGTCCATACTACAAAGGGCTACTTACGAATTTTTCACTGGGTATTCATGGAGGAGGACAAGACCACTTACAATCGCAGCATGATTATGATTTGAGGACTCGCGAGGTTGAAGAAGCACATGAGCATGGATATAATCCATATTTCAGAGGCCTACTCACTGATAGCTCTCTAGCAATGGAGATTCGAAAACATGAGGAAGGAGGCGGAGGACGAGGATGGCGTGGCCACGGTGGCGCTGTGCCAATAAGCTTCTCATCCTTTACGTTCAACAATTTATGCTCAGGTGGTAATGATGAGAATTCAAATGACGACATCATCACAGTCCCGATAGACTTGGAAAGAAAGGGCACTTTCCCGCCGTTGTCGCCGCGGGCACCGATACCATTACCATCGCCATCACTACCACTACCACTCCCACCACCACCTCCACCGCCACTATCTATGTTTCCATCCAAAGGTATGAGTACTGCTTTAAGTACAGAGCTGAAAGTAGAAGAAGATGGGAAGCCTTTGGGGGAGAGAGAATCAGAAGAAACTACAGAGGAAAAAGCTGTGGATATTGAGAACAATAAGGAGCTGGAGGCCATGAATGAATCTGGTTTGCTAAATGAAGAGGTAGTAAAGAAGAAGTCCTTGAGGGAGAGAGTTTCCAATAAAATTTCTGAACAAACAGAGTCAGCAAATAATAAAGGTATTCCCAATCAGGGGGTTAAGGAGGAAGAAGAAGAAGGAAGCTTAAAAGAGTATGTTTGGGCTGACAAGTACCAACCCAAGGCATTGCATGAATTTATCTGCCACAAACATATTGTTTCTCAGCTTCTAACAATGATAAAAGAGGGATGTGTTTGTGATCATTTTATATTTGAAGGACCACCTGGTGTGGGAAAGAGAACCATGATACGAGCTCTACTTCGAGAGGTCTTTGGCCACGACGAAGTCAAGGTGATTGAGGAGTATAGAACATTCGTATTAAAGGGGGAGGTGATAGGAAGCATCCAAGTGCCAATAATAAAATCATTACATCATGTAGAGGTCAATCTCTCTCAAACGGAAGGGTATAAAGAACAAGTGGTTGCTGATTTATTAAGAGAAACTTACGACAAGATCATCAATATTTCAATGCCTTGCGAGCCAAAAAACTGCCACGCCATAATTATACACGAGGCGGAGAAACTATCATCAGAATCATTGTTGTACATAAAGTGGATGCTTGAAAGGTATAATAATGGTTGCAATAAAGTCTTCTTTTGCTGCGCTGATGAATCCAAGCTCCAAATTGTCAAACCTCTCTGCAAAACTTTTCGTCTTTCTCCTCCTTCCACTCAAGAGATTGTTGAGGTTTTGAAATACATAGGGAAAGAAGAAGGAAAAGATTTGTCCTCAGAATTCCTTACTAAGGTTGTTGAGAAGTCAAAGAACAATCTTCGTCAGACCATTCGTTCTTTGGAGGCGACTTGCCTGAACAAGGATTCAATCAAAGATGACGAGTTAATTTTAACAGGATGGGAAGATGACATCTCAGATATTGCTAAGACCATACTTAAAGAGCAAAGCTCAAAACAGCTATACAAGATTCATTTGAAGCTTCAAAGTCTCATGATTCACAAGGTTTCACCTGACTTTATTTACAAGTATTTGATATCAGAGCTAAAATCTCTGGTAGATGAATCACTAAAGCCAGGGCTTGAAAAACTCAAGACGGAGCACAATCAAAATGTACATGGAATCAAGATGAGGAGTGGGAAGCATTCTGGTCATGGTCACAACAAAGAAAGAGAATCTGATGAAACGAACAATGAAACACCAAAGAAGAAATCTTGCAGTTACTCAGAAGTGGAAGAATTCATAGCAAAATTCATGAATTGGTGCAAGAGTTCAGCTGCAAAAAGTGATAATATGTAA 2256 0.414 MSSSPNASCRHDPSETNLSSKSHVISRDTIPSSSKASASSSSSNTTVSKVKLRNKDIDHDQINNNHEPSSPYYKGLLYQPISINTEHNSQNHHHHHPSGSHNSSNSRAPTTTPTSSESSPYYKGLLTNFSLGIHGGGQDHLQSQHDYDLRTREVEEAHEHGYNPYFRGLLTDSSLAMEIRKHEEGGGGRGWRGHGGAVPISFSSFTFNNLCSGGNDENSNDDIITVPIDLERKGTFPPLSPRAPIPLPSPSLPLPLPPPPPPPLSMFPSKGMSTALSTELKVEEDGKPLGERESEETTEEKAVDIENNKELEAMNESGLLNEEVVKKKSLRERVSNKISEQTESANNKGIPNQGVKEEEEEGSLKEYVWADKYQPKALHEFICHKHIVSQLLTMIKEGCVCDHFIFEGPPGVGKRTMIRALLREVFGHDEVKVIEEYRTFVLKGEVIGSIQVPIIKSLHHVEVNLSQTEGYKEQVVADLLRETYDKIINISMPCEPKNCHAIIIHEAEKLSSESLLYIKWMLERYNNGCNKVFFCCADESKLQIVKPLCKTFRLSPPSTQEIVEVLKYIGKEEGKDLSSEFLTKVVEKSKNNLRQTIRSLEATCLNKDSIKDDELILTGWEDDISDIAKTILKEQSSKQLYKIHLKLQSLMIHKVSPDFIYKYLISELKSLVDESLKPGLEKLKTEHNQNVHGIKMRSGKHSGHGHNKERESDETNNETPKKKSCSYSEVEEFIAKFMNWCKSSAAKSDNM 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1535 751 MobiDBLite consensus disorder prediction 1 74 - -
Acco07g1535 751 FunFam replication factor C subunit 3 558 616 - -
Acco07g1535 751 MobiDBLite consensus disorder prediction 704 724 - -
Acco07g1535 751 MobiDBLite consensus disorder prediction 87 121 - -
Acco07g1535 751 MobiDBLite consensus disorder prediction 235 302 - -
Acco07g1535 751 MobiDBLite consensus disorder prediction 101 121 - -
Acco07g1535 751 Gene3D - 619 741 - -
Acco07g1535 751 MobiDBLite consensus disorder prediction 239 267 - -
Acco07g1535 751 Pfam Rad17 P-loop domain 368 474 - -
Acco07g1535 751 MobiDBLite consensus disorder prediction 337 358 - -
Acco07g1535 751 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 369 696 - -
Acco07g1535 751 Gene3D - 558 618 - -
Acco07g1535 751 MobiDBLite consensus disorder prediction 1 50 - -
Acco07g1535 751 MobiDBLite consensus disorder prediction 685 724 - -
Acco07g1535 751 Gene3D - 367 557 IPR027417 -
Acco07g1535 751 MobiDBLite consensus disorder prediction 280 302 - -
Acco07g1535 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 606 IPR027417 -
Acco07g1535 751 SUPERFAMILY post-AAA+ oligomerization domain-like 619 688 IPR008921 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1535 368 739 Core DNA Replication Machinery Family AT5G27740 28.836 1.74e-43 159