Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1524 ATGTCTTCTCTGGCCTCTTCATACTCTCATCAACCCAAATTGAAATTCGAATACGACGTGTGCTTAACTTTCTTCAATCTTGAAGAAGGTGTGAGCGCCTTTATCAAGAATATTTTAAGGGATGCTGGATTCAACTTTTTCATTCATGACTTACTCATGGGTTATGGCAATTGGGATATGTTAGAAAGGTGCAGAATTGCGGTTGTGGTAATCACACCACAGTTTGTTAGCACCGAGAAATGTCTTGAGAGACTGGTGGACATAATTTTGGTTCACAAAACACTGTTACCTTTCTTGTATGGAGTGAGCTACAATGAAGCGCGTGTGCGGTTCGAGAATTTCATCTTCCGAACATATATGAATTGGCAGTTGGACATTTTGCACCAAAGAGCCGATGCTGTGTGTAATTCACTATATGGCTTCACACTGTCAGATGATTTTAGTGACAAAGAAATAGTCAAAAACCTTATTGCAAGAGCCATATCACAAGTAGGATTGCAACCTCGTGTAAATGAAGTGCTTTACCGATCGGGCTGGAAACCCCATCATCATAAGAAAAGTACAATCATAGTCGGAATTTGGGGGATTGGAGGTATAGGTAAAACTACGATCGTCAGAGCTATTTATGATGCAATTGGGGGATATTTTTATTGCAGAAGTTTCCTTGCTAACATCAAGGATGTATGGGAGAACAATGATGGTCAAGCTCTTCTACAAAGGCAACTTCTTTTAGATATTCAAGATAATAATATGAAGCAAGGACGTCATAGACGAGCCCTAATTGTACTTGATGATGTAAATCAGGGGTCAGCATTTCCCATAGAAACGGGAATGAAAGTACTCATTGAACTTAGCCTTGTAAAAGTTGACCATGATAAGATCCATGTGCATGATTTGCTACAAGAGATCGGGGGGCAAATCACTACAAACAAGCCAAAGTTCACATATACCTATGATGTATTCTTAAGTTTTAGAGGTGAGGATACGCGTAAAACATTCGCTACTCATCTGTTTACTTCTCTAAAACAAGCAGGAATTGAGGTCTTCATGGATGAAGATGGGATTGACAGGGGAGAACATATTTCAGGTTCGTTACTACGAGCAATTGAATGTTCAAGAATTTCAATCATTATATTCTCAAAGAATTATGCTGGCTCTAGTTGGTGCTTGCAAGAATTAGAGAAAATCATGGAGTGTTACAAAACAACTGATCAAGAGGTTTTTCCTATATTCTATGATGTGCAACCATCTGAAGTTCGTAAACAACAAAATGCCTTTGGAAAAGCATGGAAACGGCTCATGACAAGACCCTCAAGTAGTAAAGGCAATAAATTGACATACAATTTCAAGAGAGTCATTATTGAGGCTGCTAACTTATCAGGGTGGGATATGAAAAACTACAGAACTGAGATTGAAGAAATCATTCGAGAGCAATCACCAGAGGAGCCAGAGGAGCGTACAAGATTATGGCTTAATGATGACGTGTTGAATGTGTTAGAAAACAACATTGGAACAATAGCCATCAAGGGATTGTCTTTAAACATGCCAAGACACAATTCAGTAACCTTGAGTACCAATGCATTTGAGAAGATAAAGAAGCTTCGTTTACTCAACTTCAATCATGTACAACTTAATGGAGACTATGCTTATTTGTCAACAGAATTGAGATGGCTTTGCTGGCATGGATTTCTCTTAGAAAACTTGCCAACAAACTTCAGTCTAAAAAAGATAGTTGTCATTGATTTAAAGTGGAGTAATCTCAAAAAAGTATGGGAGAAAAGCCAGGTTTTGAAATTGTTGAAGATTCTCAATTTGAGTCATTCTCCTTACCTAACAGAAACACCTGACTTTTCAAAATTACCACATCTTGAGAAGTTGATACTTAAAGATTGTCCATGTTTGTCTATGATTCACCCTTCCATTGGAATTCTTGGACATCTTATATTGTTAAATTTAAAAAACTGCAATGGCCTGAAGCATCTCCCAAGAAGTATATATGACTTGAAATCTTTGAGAACACTTAATCTTTTTGGTTGTTCTAAGATTGAAAGGTTGGATGAAGACATTGAGAAAATGGAGTCCTTAACGATTTTGGAGGCAAGTCAAACTGCTATAACACAAGCACCCATCTCATTAGTGAGAATGAAGAATATTAAATATGTTTCTTTATGTGGTTATGAAGGATTGTCACGTGATGTATTTCAATCTATTATTTTGTCATGGATGCCCCCAACAAATCCTTCAAGGTCATTATTTCAAGCATTTGGAATCATGCCATTGATAGTCAAGTGTCTTTCACATCCTTTATTTGCCAAAAGTTGTGAGATGTTTAAAGAAATACCAAGAACATCTCAAGCTTCATGTAAAAAGGCTCTAGCACTAACTGATTTTCATGAGGAAGTTCGTAAGGAATGGTCAGAAACATTCATGAGTTCTATTATTATTCCTACAGGCAAGTTCAACCAAGTTATTATTGATACAATTTCAAAGAGTATTTCACAGGGATGCAGAGAAAGAGGGTTTAGACTTAATTCTCTTCCTGGAGACAATCATCCTCATTGGAAAAATTTCAAAGGAGAAGGATCTTCATTATTTTTTGAAGTTCCTCAAATTATGGGCAAAAGCTTGAAAGGATTGATTGTGTGCATCATCTATTTGTCTTCTCAAAACAGCATGACATCTGTATATCCTATTGGTGTCTTGGTATCAAACCATACAAAGGCAACCATTAAATTCTACCAGAAAGATGCAACAACTGCTTCAAATGATGAAGATAGTTGGCAAGACATGATTTATTATTTGGAGCCTGGTAATAGAGTGGAGCTTATAGTAACTTTTGCATGTGAATTGAAAGTGAAAAGCACACTTGTCTATTTGGTATATGATGAAGATGTTAGTAACAGAATCATGTATTGA 2916 0.3676 MSSLASSYSHQPKLKFEYDVCLTFFNLEEGVSAFIKNILRDAGFNFFIHDLLMGYGNWDMLERCRIAVVVITPQFVSTEKCLERLVDIILVHKTLLPFLYGVSYNEARVRFENFIFRTYMNWQLDILHQRADAVCNSLYGFTLSDDFSDKEIVKNLIARAISQVGLQPRVNEVLYRSGWKPHHHKKSTIIVGIWGIGGIGKTTIVRAIYDAIGGYFYCRSFLANIKDVWENNDGQALLQRQLLLDIQDNNMKQGRHRRALIVLDDVNQGSAFPIETGMKVLIELSLVKVDHDKIHVHDLLQEIGGQITTNKPKFTYTYDVFLSFRGEDTRKTFATHLFTSLKQAGIEVFMDEDGIDRGEHISGSLLRAIECSRISIIIFSKNYAGSSWCLQELEKIMECYKTTDQEVFPIFYDVQPSEVRKQQNAFGKAWKRLMTRPSSSKGNKLTYNFKRVIIEAANLSGWDMKNYRTEIEEIIREQSPEEPEERTRLWLNDDVLNVLENNIGTIAIKGLSLNMPRHNSVTLSTNAFEKIKKLRLLNFNHVQLNGDYAYLSTELRWLCWHGFLLENLPTNFSLKKIVVIDLKWSNLKKVWEKSQVLKLLKILNLSHSPYLTETPDFSKLPHLEKLILKDCPCLSMIHPSIGILGHLILLNLKNCNGLKHLPRSIYDLKSLRTLNLFGCSKIERLDEDIEKMESLTILEASQTAITQAPISLVRMKNIKYVSLCGYEGLSRDVFQSIILSWMPPTNPSRSLFQAFGIMPLIVKCLSHPLFAKSCEMFKEIPRTSQASCKKALALTDFHEEVRKEWSETFMSSIIIPTGKFNQVIIDTISKSISQGCRERGFRLNSLPGDNHPHWKNFKGEGSSLFFEVPQIMGKSLKGLIVCIIYLSSQNSMTSVYPIGVLVSNHTKATIKFYQKDATTASNDEDSWQDMIYYLEPGNRVELIVTFACELKVKSTLVYLVYDEDVSNRIMY 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1524 971 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 119 IPR035897 -
Acco07g1524 971 ProSiteProfiles TIR domain profile. 16 161 IPR000157 GO:0007165
Acco07g1524 971 ProSiteProfiles TIR domain profile. 316 471 IPR000157 GO:0007165
Acco07g1524 971 SUPERFAMILY L domain-like 513 729 - -
Acco07g1524 971 PRINTS Disease resistance protein signature 190 205 - -
Acco07g1524 971 PRINTS Disease resistance protein signature 253 267 - -
Acco07g1524 971 PRINTS Disease resistance protein signature 666 682 - -
Acco07g1524 971 FunFam Disease resistance protein (TIR-NBS-LRR class) 315 480 - -
Acco07g1524 971 Gene3D - 315 479 IPR035897 -
Acco07g1524 971 SMART till_3 317 459 IPR000157 GO:0007165
Acco07g1524 971 SUPERFAMILY Toll/Interleukin receptor TIR domain 314 433 IPR035897 -
Acco07g1524 971 Gene3D - 145 282 IPR027417 -
Acco07g1524 971 Pfam TIR domain 318 436 IPR000157 GO:0007165
Acco07g1524 971 Gene3D - 1 123 IPR035897 -
Acco07g1524 971 Gene3D Ribonuclease Inhibitor 480 744 IPR032675 -
Acco07g1524 971 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 268 IPR044974 GO:0006952
Acco07g1524 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 270 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1524 Acco-ChrAcco07 29307338 29315732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1524 473 712 WRKY Transcription Factor Family AT4G12020 34.375 5.58e-27 117