Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1489 ATGGTGGGGAAAGATGATGGTTTGGGGTTAGGGTTGAGCCTGAGCTTGGGACTGGGAATGAATCCGTCTTCTTCTTCTAAGGAAAGTCTCATGCAGAAGAAGATTTCTTCTCGTACGGTTCTGAATCAGAGAGGTTCATGGAATGATATTTTCCAGTTACCTGATCGGAGCTGCGAAGTGAGGACGTTGCTCCGGGGCGTGGATGTTAATTTAGCGCCGCCACTGTTGACGGTGGTGGACTGTGACGACGAGAATGGCGTCTCCTCGCCGAACAGTACGGTGTCGAGCATCAGCGGAAAGCGGAGCGAGAGGGAGTCTATTGGCGGGGAGCATGAAGCCGAGCGCGCGTCCTGTTCTCGAGGGAGTGATGATGATGACGGCGGAGACGGCGACGGAAGAGATGGCGACGGAGATGTTGATGGCGATACTTCGAGGAAGAAGCTACGGCTGTCGAAGGAACAATCGATTGTGCTGGAGGAAACGTTCAAGGATCACAATACCCTCAATCCGAAGCAAAAACAAGAATTGGCCAAAAAGCTGAATCTGAGACCGAGGCAAGTGGAAGTGTGGTTTCAGAACAGGAGGGCAAGGACTAAGTTGAAGCAAACTGAAGTGGATTGTGAGTACTTAAGGAGATGTTGTGAGACTTTGACTGAAGAAAATAGGAGGCTGCAAAAGGAAGTGCAAGAGCTTAGGGCACTAAAACTATCCCCGCAACTCTACATGCACATGAACCCTCCCACCACTCTTACAATGTGCTCTTCATGTGAGCGCGTCGCGGTCTCGTCCACACCATCCTCCTCCTCAACAGCCACCGCCGCCGGAGCTCCTCCCATGATGGCTTCATCCAACTCAGCCCCATTGAGCTCCAGCATTCAAAGGCCGGTTCCCCTCCTCCCTTGGGCGGCTAACTCAAATCGAAACCGTCCGGCGGACCGGCCATAA 945 0.528 MVGKDDGLGLGLSLSLGLGMNPSSSSKESLMQKKISSRTVLNQRGSWNDIFQLPDRSCEVRTLLRGVDVNLAPPLLTVVDCDDENGVSSPNSTVSSISGKRSERESIGGEHEAERASCSRGSDDDDGGDGDGRDGDGDVDGDTSRKKLRLSKEQSIVLEETFKDHNTLNPKQKQELAKKLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTMCSSCERVAVSSTPSSSSTATAAGAPPMMASSNSAPLSSSIQRPVPLLPWAANSNRNRPADRP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1489 314 Pfam Homeobox associated leucine zipper 201 235 IPR003106 GO:0006355|GO:0043565
Acco07g1489 314 MobiDBLite consensus disorder prediction 84 102 - -
Acco07g1489 314 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 13 275 - -
Acco07g1489 314 Pfam HD-ZIP protein N terminus 1 105 IPR006712 GO:0005634
Acco07g1489 314 ProSiteProfiles 'Homeobox' domain profile. 141 201 IPR001356 GO:0003677
Acco07g1489 314 Coils Coil 207 237 - -
Acco07g1489 314 MobiDBLite consensus disorder prediction 103 127 - -
Acco07g1489 314 CDD homeodomain 145 202 IPR001356 GO:0003677
Acco07g1489 314 Pfam Homeodomain 145 199 IPR001356 GO:0003677
Acco07g1489 314 Gene3D - 149 199 - -
Acco07g1489 314 SMART HOX_1 143 205 IPR001356 GO:0003677
Acco07g1489 314 MobiDBLite consensus disorder prediction 262 292 - -
Acco07g1489 314 ProSitePatterns 'Homeobox' domain signature. 176 199 IPR017970 GO:0000981|GO:0006355
Acco07g1489 314 MobiDBLite consensus disorder prediction 80 148 - -
Acco07g1489 314 FunFam Homeobox-leucine zipper protein 18 130 206 - -
Acco07g1489 314 SMART halz 201 244 IPR003106 GO:0006355|GO:0043565
Acco07g1489 314 SUPERFAMILY Homeodomain-like 129 202 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1489 Acco-ChrAcco07 28639976 28641860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1489 44 311 Homeobox Transcription Factor Family AT3G60390 60.284 1.82e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco07g1489 HD-ZIP_N 2.6e-29 No_clan