Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1482 ATGACAACGGATTCGTCTCTCGAAGGTTTCACACTTGATCCTGCCAAATGCAGTAAGTTGAGTATGGAGGAAAAAAGAGGACTTGTATATGAAATATCTAAGTGGCCAAATGATGCATTGGAAATGCTACAGTCATGGAGCCGTCAAGAGATTTTACAAATCCTTTGCGCTGAGATGGGGAAAGAGAGGAAGTATACTGGATTAACAAAGGTGAAAATTATAGAAAACCTTCTGAAAATTGTTTCTGAAAAGAAATCTGGAGCTCAGGAAACTGCAACAGACCCTGAACCACATTCTTCCACTTCACATAGCCAGAAACCTGCTAAAAGGCAGAGGAAAAATGAGAATCCGTCTCGATTACCTGTTCCAATAAATGATGTTTCTGTCAACAATGGAGTTGGAGATGTAAGTAGTATTTCGTACTGCAAAAACACAGCATGCAAAGCTACCCTAAGTGAAGCAGATGTGTTTTGTAAAAGATGCTCTTGCTGCATTTGCCATAAATATGATGACAACAAAGATCCTAGCCTTTGGTTAATATGTGGCTCTGAGCCCCCATTTTTTGGTGTTTCTTGTGGCTTATCATGTCATCTTGAGTGTGCTTTAAAGCATGATAACTCTGGCATTGCCAAAGATGGAAAACGTCCCAAGCTTGATGGAAGCTTCTACTGCTTCTCATGTGGGAAAGTGAATGATTTGCTCGGATGCTGGAGAAAGCAACTGATGGTGGCAAAGGATACTAGACGTGTCGACATACTATGCTACCGTGTTTCCTTGAGCCAAAGAATTTTTCAAGGGACTGAAAAGTATAAAAAACTTCACGAAATTGTTAATGAGGCGGTTAGGAAACTTGAACCTGAATTAGGCCCACTAACTGGTTCACCAGTGAAGATTGGTAGGGGCATTGTGAACAGACTTTCGTCAGGGCCAGAGGTTCAAAAACTCTGTGGTTTGGCTTTGGAATCATTAGATTCTTTTCTTTCTAAAAGGGTTACACTTCCATCACCTGATCCAGCAATTCAAGATGCAAATATGGTTGCTACAAATATGGTGAGATTCAAAGATGTCAGGGATACATCTCTGACTGTGATTTTGGGTTCTGAAGATGCTTCTGAAGAAAATATCAGTGGCTATTCCCTTTGGCATCGCAAGGCTATTGATGAGGAATATTCTGTTGAACGAACTTGCACTTTGGTTCTACCTGACAGAAGTTTCAATGTAAGGGGTCTAATTCCAGCTACAAAATATAGTCTCAAAGTTGTTTCCTATAATGGCACAAGGGAGATGGGTATGTGTGAAGTTCAAATCTCAACAGAGCCTGGTGAGTGTGAAGTTCCTACCTGTTCAGCAACCGAAAGAAGTCAGAGCCCAGTAACCAACTGTAGCAGCCATTCCAATCCTTCGTCAGTGGAAGATGAAACCAATAACAGTAATCCATTTAGTGATCAGACTGATGATCGGGCAGATAATTATCTTACTTATCACAAGGATGCTGACAAGCTTGCTTCTGAAAATTTATCCAATGATGTTATTAAATGTTCCAACGCTCTTGGAGGTGGACGACCTGCCGATGCAGATTCTTTGTCAGAAAAGCAACGGCCTAGAGGCTTGGCTGTAAATATTCCTGGTTCTGAAATTCTAAAGCTTGAAAACAACCATTCACCAGAGGGACAAATCACCGAGGACTTGAGCACTGACGATGGGTTGAATTCCCCTGTTCAGACTGGGAGGGAATGTGTCCCACTCATACGTAGCTCTGAAGCAAGTTTGCCTATTACTCCTTGCAAGTTGGAAATACTCAAGGATGGGCCGGGAAGAAGCGGGAGATCCAAGTCCATGGGTAAGGATCAAGAAAATGGGTCTGGGAAGAGAGAGGGCCCTCAAGATGGAAGCACATCTAAGAAGAGAGCTGAACAAAGGCAAGATGAGGTCTGCGCTGCGAACGGGTATTCAGATCGGGATTTTGAGTATTACGTGAAGGTGATCAGATGGCTTGAGTGTGAAGGACACATAGAGAAGAACTTCAGACAGAAATTTTTGACATGGTACAGCTTGAGAGCAACACCACAGGAAGTAAAGATTGTGAAAGTATATATCGATACATTTCTCGAAGATCCAGCTTCTCTTGCAGAGCAGCTTGTGGACACATTCTCAGAATGCTTATCAAACAAAAGACCATCTGTTGTGCCAGCTGGGTTCTGCATGAAGCTCTGGCATTGA 2220 0.4239 MTTDSSLEGFTLDPAKCSKLSMEEKRGLVYEISKWPNDALEMLQSWSRQEILQILCAEMGKERKYTGLTKVKIIENLLKIVSEKKSGAQETATDPEPHSSTSHSQKPAKRQRKNENPSRLPVPINDVSVNNGVGDVSSISYCKNTACKATLSEADVFCKRCSCCICHKYDDNKDPSLWLICGSEPPFFGVSCGLSCHLECALKHDNSGIAKDGKRPKLDGSFYCFSCGKVNDLLGCWRKQLMVAKDTRRVDILCYRVSLSQRIFQGTEKYKKLHEIVNEAVRKLEPELGPLTGSPVKIGRGIVNRLSSGPEVQKLCGLALESLDSFLSKRVTLPSPDPAIQDANMVATNMVRFKDVRDTSLTVILGSEDASEENISGYSLWHRKAIDEEYSVERTCTLVLPDRSFNVRGLIPATKYSLKVVSYNGTREMGMCEVQISTEPGECEVPTCSATERSQSPVTNCSSHSNPSSVEDETNNSNPFSDQTDDRADNYLTYHKDADKLASENLSNDVIKCSNALGGGRPADADSLSEKQRPRGLAVNIPGSEILKLENNHSPEGQITEDLSTDDGLNSPVQTGRECVPLIRSSEASLPITPCKLEILKDGPGRSGRSKSMGKDQENGSGKREGPQDGSTSKKRAEQRQDEVCAANGYSDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVKIVKVYIDTFLEDPASLAEQLVDTFSECLSNKRPSVVPAGFCMKLWH 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1482 739 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
Acco07g1482 739 SUPERFAMILY Fibronectin type III 352 426 IPR036116 GO:0005515
Acco07g1482 739 CDD FN3 351 425 IPR003961 GO:0005515
Acco07g1482 739 MobiDBLite consensus disorder prediction 551 572 - -
Acco07g1482 739 MobiDBLite consensus disorder prediction 86 104 - -
Acco07g1482 739 CDD PHD_VIN3_plant 162 227 - -
Acco07g1482 739 PANTHER VIN3-LIKE PROTEIN 2-RELATED 10 739 IPR044514 GO:0010048|GO:0040029
Acco07g1482 739 MobiDBLite consensus disorder prediction 86 124 - -
Acco07g1482 739 MobiDBLite consensus disorder prediction 599 641 - -
Acco07g1482 739 MobiDBLite consensus disorder prediction 602 641 - -
Acco07g1482 739 MobiDBLite consensus disorder prediction 517 575 - -
Acco07g1482 739 Gene3D Immunoglobulins 347 442 IPR013783 -
Acco07g1482 739 MobiDBLite consensus disorder prediction 443 487 - -
Acco07g1482 739 ProSiteProfiles Fibronectin type-III domain profile. 346 442 IPR003961 GO:0005515
Acco07g1482 739 Pfam Fibronectin type III domain 351 426 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1482 Acco-ChrAcco07 28526851 28531566 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1482 4 476 PHD Gene Family AT4G30200 54.890 5.94e-163 483