Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1478 ATGGAAAATGATCAAGCAATACCAAAACCATCGGCACGGTATGATGTGTTCTTGAGTTTTAGAGGCGAAGACACTAGGGCATCTTTCACTTCTCATCTCTCCTCCTCCTTAAGAAAGGATGGAATTGTTGTTTTCAAAGACGATACTGACCTTCCTCGCGGGAATAATATCTCACTCGAATTGCAACGTGGAATTGAGAATTCTACAATTTCAATCATTATCTTCTCCAAAGATTATGCTGGCTCAAGATGGTGCCTCAATGAGCTCTCAAAAATCATGGAGGTTCACAGAGTTCAAGGTCAGGTAGTTTTTCCTGTGTTTTATGGCGTGGATCCATCAGAAGTTCGTAATCAAATCTCTAATTTTGGAGAAGCGTTTCAAGATCTTATACAAAAAAGTTCACCCACACATGATCAAGTATTGAGGTGGAGGTCAGATCTCCGTGAAGCTGCGGCCATTGCAGGTTTTGTTGTGCTCAATTCCAGGAATGAAAGTGAGGATATCAAGAATATTGTTGAGCATGTTTGTGAAATATTGGACAAGAAAGACTTGTTTGTTGCTAACTATCCTGTAGGATTGGACTCTCGCATGGAAAATTTGATAGAAATGTCAGAGAGCCATCCACCAAATGATGTTCTTGTGCTAGGGATATGGGGGATGGGCGGTATAGGTAAAACAGTGATTGCCAAAGCCATGTTTAACAAAATTGGTCAAAATTTTGAGAGCAGAAGTTTTCTTTCAAATATTAGAGAAGTTTGGAAGCAAGATGGTGGTCCAATTAACTTGCAACAACAACTTGTTTCAGACATCTATAAAACAACAAAGATCAAAATACGTTGTGTTGAATCAGGAAAAAGCATACTAAAAGAGAGACTTGGCCAAAGGCAAGCATTTGTTGTGTTGGATGATGTAGATAAGGTAGAGCAACTAAATGCTTTGTCTGGAAGTGTTAAATGGTTTGGTCTAGGAAGTAGGATAATCATCACAACAAGAGATGAACATCTACTGAGATTCCTTAATGTGGATGCGGACCATGTATATAGAGTAAGGAACATGGACAAAAGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTTAGACAACCAAGACCTAGAGAAGGATTTGTTGAACTTTCCAGAAATATAGTTGCTTATTCTGGAGGACTACCACTAGCTCTTGAAATTATTGGTTGCTATTTGTTTGAGAGGGAAGCGACAGAGTGGAAGAGTGTATTAAACAAACTAAAAAAAATCCCCAATGAACAAATACAAAAGAAGCTAAAGATAAGCTTTGATGGTTTAAATGATGATATGGAAAGAGAAATCTTCCTTGATATATCTTGCTTCTTTATTGGAATGGACAGGAATGATGTCACCCATATATTGAATACCAGTGGATTTTTTGCAGACATTGGAATTAGTGTCCTAGTGGAAAGAAGCCTTATAACCATTGATGAGAAGAACAAGATTGGTATGCATGATTTGTTGCGAGATATGGGAAGAGAAATAATCCGTGAAAAGTCACCAAAAGATTTTGGAAAGCGTAGTAGGTTATGGTTTCGTGAAGATGTGATTGACGTCTTATCAAAACATGCTGGTACAGAATCTATTGAGGGACTAGCTTTGAATTTGTCACAAGATGATAAAGTTTCTTTTTCAACCAAAGCTTTTAACAAGATGAACAAACTCAGACTACTTTGTCTTATTAATGTGGAACTTGATGGAGACTATAAATACATTAGTAGAGATCTCAAATGGCTTTGTTGGCACAGGTTTCCTTTGAAATACGTCCCTACCAACTTCTTTCAAAATAATTTAGTTGCTATTGAATTAAAATACAGCAACCTGAGACTCTGGAGGGAACCTCAGCCACTGGAGAATCTTAAAACCCTCAATCTTAGCCACTCCCCTGACTTGGTGTGTACTCCAAATTTTTCAAAACTACCAAATCTTGAAAAGTTGATCCTCAAAGATTGTCCAAGTTTGTCTATGATACATTATACAATAGGTCAATTAGATAAACTTCATATGCTAAATTTGAAGGATTGTACTGGCCTTCATGGTCTCCCCAAAAGTATTTATAAATTGAAGTGCTTAAAAACTCTCATTCTTTCGGGTTGTTTGATGATTGAAAAGTTAGAGGAGGACATAGAGCAATTGGATTCTTTGTCAACTCTAATTGCAGACAACACAGCAATAACTCAAGTGCCCATTTCTTTAGTGAGATCAAAAAGCATTGGATATATATCTATTTGTGGTTACCAAGGATTAGCACGTCATGTGTTTCCTTCTCTCATTTGGTCAAGGATGTCTCCAACAAATAATCCTCTATCTCTTGTGCCAACATATGGTATCATGTCATCTTCGATTTCATCATCAGATATATTGAATTGCACTACCTGTGGTCCTTCATCAATTTTTCACAACCTACCAAAGCCACAAAACCCTCTATTGGAATGCATATTAGAGAATGACGATGCCGCGGAAGTAAATGAAGGTACTACAAAAATCTTGGATTCCTTATGTGCCTCAAGTTGTAGAGACTTGGCAACAGCGCCAAATACTTCAAAAATTTTGGAGATTGAATCTTCTTTGTTGGCTGATAATAACCATAGTCAAGTTGGTACCTCAAGGCGAGACAAATGCTTGAGACACCTTCTAATTCACATTGGAAACAATGACCAAGTCACTAGTTCTCTTTCAGAGTGTATTTTACAGGGATTGACTCTCAGAGATTATTGTGATGATTGTGTCCTCCCGGGTGATAATTATCCCTATTGGCAATGCTTCAAGGGTGAAGGAGCTTCTGTCAAATTTAAAATTCCTCTACTTTATAGTTCTGAGTTAAAAGGGGTGACTGTTTTCTGTGAGTACTACCCCTCACATGATTTGAGCAACGTAGAGTATGACTCTTTCATTAGCATGTTGATCATAAATTATACAAAGATGACCACTCTGCTCTATAGGCGAGACACAATAACTTCCATTGAAGAAGCAAAATGGAAGGAAATTATATCAAATTTAGACTCTGATGATCAAGTGGAGATCACTGCACTCTTTGGTAATGGATTCACAGTGAAAAGAACAGCGGTGTACTTAAAATATTGCGAGCTATTTCATGAGCAAATGGAGGATCCACCATCATCAAATCATCATGGACCTCCGAAGGTGAATTTTTGGCAGGACCCAATGAATCCGTCTAAATGGAAAGAAGAACACTTTGTCATTGTTTCTTTAATTGGATGGGGCTTACTCTTCTATGGTGGATACAAGTTTTTTACCAAAGGCAAGGACTAG 3297 0.3764 MENDQAIPKPSARYDVFLSFRGEDTRASFTSHLSSSLRKDGIVVFKDDTDLPRGNNISLELQRGIENSTISIIIFSKDYAGSRWCLNELSKIMEVHRVQGQVVFPVFYGVDPSEVRNQISNFGEAFQDLIQKSSPTHDQVLRWRSDLREAAAIAGFVVLNSRNESEDIKNIVEHVCEILDKKDLFVANYPVGLDSRMENLIEMSESHPPNDVLVLGIWGMGGIGKTVIAKAMFNKIGQNFESRSFLSNIREVWKQDGGPINLQQQLVSDIYKTTKIKIRCVESGKSILKERLGQRQAFVVLDDVDKVEQLNALSGSVKWFGLGSRIIITTRDEHLLRFLNVDADHVYRVRNMDKSESIELFSWHAFRQPRPREGFVELSRNIVAYSGGLPLALEIIGCYLFEREATEWKSVLNKLKKIPNEQIQKKLKISFDGLNDDMEREIFLDISCFFIGMDRNDVTHILNTSGFFADIGISVLVERSLITIDEKNKIGMHDLLRDMGREIIREKSPKDFGKRSRLWFREDVIDVLSKHAGTESIEGLALNLSQDDKVSFSTKAFNKMNKLRLLCLINVELDGDYKYISRDLKWLCWHRFPLKYVPTNFFQNNLVAIELKYSNLRLWREPQPLENLKTLNLSHSPDLVCTPNFSKLPNLEKLILKDCPSLSMIHYTIGQLDKLHMLNLKDCTGLHGLPKSIYKLKCLKTLILSGCLMIEKLEEDIEQLDSLSTLIADNTAITQVPISLVRSKSIGYISICGYQGLARHVFPSLIWSRMSPTNNPLSLVPTYGIMSSSISSSDILNCTTCGPSSIFHNLPKPQNPLLECILENDDAAEVNEGTTKILDSLCASSCRDLATAPNTSKILEIESSLLADNNHSQVGTSRRDKCLRHLLIHIGNNDQVTSSLSECILQGLTLRDYCDDCVLPGDNYPYWQCFKGEGASVKFKIPLLYSSELKGVTVFCEYYPSHDLSNVEYDSFISMLIINYTKMTTLLYRRDTITSIEEAKWKEIISNLDSDDQVEITALFGNGFTVKRTAVYLKYCELFHEQMEDPPSSNHHGPPKVNFWQDPMNPSKWKEEHFVIVSLIGWGLLFYGGYKFFTKGKD 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1478 1098 Gene3D - 351 435 IPR042197 -
Acco07g1478 1098 Pfam NB-ARC domain 207 428 IPR002182 GO:0043531
Acco07g1478 1098 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Acco07g1478 1098 SUPERFAMILY L domain-like 505 896 - -
Acco07g1478 1098 SUPERFAMILY "Winged helix" DNA-binding domain 422 528 IPR036390 -
Acco07g1478 1098 Gene3D - 185 346 IPR027417 -
Acco07g1478 1098 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 155 IPR035897 -
Acco07g1478 1098 Gene3D - 9 184 IPR035897 -
Acco07g1478 1098 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 863 IPR044974 GO:0006952
Acco07g1478 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 446 IPR027417 -
Acco07g1478 1098 Pfam TIR domain 14 178 IPR000157 GO:0007165
Acco07g1478 1098 SMART till_3 13 153 IPR000157 GO:0007165
Acco07g1478 1098 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 181 - -
Acco07g1478 1098 PRINTS Disease resistance protein signature 386 400 - -
Acco07g1478 1098 PRINTS Disease resistance protein signature 623 639 - -
Acco07g1478 1098 PRINTS Disease resistance protein signature 291 305 - -
Acco07g1478 1098 PRINTS Disease resistance protein signature 214 229 - -
Acco07g1478 1098 Gene3D Ribonuclease Inhibitor 531 761 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1478 Acco-ChrAcco07 28444475 28449979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1478 11 740 WRKY Transcription Factor Family AT4G12020 30.544 3.52e-78 280