Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1466 ATGTCTTTTATCGCTTCTTCATCCTCTAATTTGGAATTCTCTTTTGAGTACGACGTCTTCTTAACTATGAGCCATCCCAAACATGATGTGAAAGCCCACTTGGAAAAAGACTTACGAGATGTTGGAATCAAACCTTTGATTGATGATCAGATGGAGGAGTTTCTCATGTACGAGATAGTGAAGTGTAGAATGATTGTGGTTGTTTTCACACCAGAATTCGATGAGTCCGACATATTTCTGAAGAGGCTTATGAATATAAGGCGGTGTCAAAAAATTACGAATATAAAAGTGTCGCCCGTATTCTGTGGATTGAGCGAGCAGCAAGTACGTGAGCAGTTGGAGGGTATGGATCAGAGAAGATTAGATACTTTGAATTTCGATTTCGATTTGGACTCTGGAGGATTCATCGTTGAAGCTGCTTCACTTTTGAATTCAGCAAGAGCCATCGCTGAAGCTGCTTCCTTGTCTGATTTGGGGGATAAAATCAGCAATCTTATTGCAAAGATTGATAAGTTAGACAAATACTTGTTTGATGTGGAATTGTTTCACGATCTTCAGCACCATCAAGCAGGGTTACAACGTCGTCTTAAGGAATTGCTTGAGATTTTGCAGCAGAAACACATTACTTCAGAAGATAGGTTCATAGTTGGAATCTGGGGTGATGGAGGTGACATTACCGGAGTGGCAAGAAGTCGACCTGACAAGCCAAAGCTCAAATATAGTTATGATGTATTTTTGAGTTTTAGAGGTGAAGATACACGTAAATCCTTTGCTACTCATCTGTACTCTGCTCTAAAGCAAGCAGGTATTGACATCTACATGGATGAAGAACGAATTGAAAGAGGAGAAGACATTTCATCTTCACTACTTCAAGCAATTGAAAGTTCCAAAATTTCAGTAATTATATTATCAAAGAATTATGCTGGTTCTAGTTGGTGCTTGCAAGAGTTAAAGAAAATCATGGAGTGTTACAAAACAACCTATCAAGAGGTTTTACCTATATTTTTTGATGTGCGACCATCTGAGGTTCGAAAACAAACAAATTCCTTCGGAAAAGCATGGGAAAAACTTGTCAAGAGAACTTTAAGCAATGGAGTGGAGAACTGGAAAATTAATTCAAGGAGGGCTCTCATAGAAGTTGCAAATTTATCTGGGTGGGACATGCATAACTACAGAACTGAAACTGAGCTGATTGATGAGGTCATTGAAACTATTACAAAGAAGTTAGGAGACAACAGAAGTCTATTTGTTGCTCACCATCCAGTGGGATTGAAGTCTCGTATGCAAGATATCCTCCACTTGCTAAGAAATAAATCAAAAGATGTTACCATTGCTGGGATTTGGGGGATGGGGGGCATTGGTAAGACAACAATTTCTAAAGCCATCTACAATCAAGTTGGCCATGGTTTTGAAGGAAAGTGTTTTCTTGCAAATGTTAGAGAAGTTTGGAAGCAAGATAATGGTCCAGTTTATTTGCAAGAGCAACTGCTTTCAGACATTTTAAAATCAAGAAGAAGGGCACTATCCAATGTCGAAATGGGGAAAACTCTACTTGAGGAAATGCTTTGTAAGAAAAAAGTACTTGTTGTACTTGATGATGTCAACAACGAAGACCAACTCCATGCATTATGTGGAAGTCGGGAATGGTTTGGTGAAGGTAGTAGAATCATCATTACAACTAGAGATGAACGCTTGCTCAAGATCCTTAGAGTAATTCATGTATACACCGTGAAAGAATTGGATGACAATGAATCTCTTGAACTTTTTAGTTGGCATGCATTTAAACAAGCGACCCCTGAACAAGATTTCACCAAACTTTCAAGAAGGGTAGTTTCTTACTCTGGAGGCTTGCCACTAGCTCTTGAAATTCTTGGCTCCTACTTGTTTGATAGAGAAACACTTATTTGGAAACGTGCCTTGGAGAAATTACAAGAAATTCCAAATGATCAAATAAATGAAAAATTAAAAATAAGCTATGATGGTTTGAGCGACAATAAAGAGAAAGATGTGTTCCTCGACATATGTTGTTTTTTGGTTGGAAAGGACAAAAGTTATGCTATACAAATATTAAATGGTTGTGGACTTCATGCAGATATTGGAATTAATCGTCTACTAGAGTTGAGTCTTGTAAAGGTTGGCAACAAAAATAAGCTTGAAATGCATGACTTATTACGCCACATGGGAAGAGAAATTATTCGTGAGCAGTCACCAGAGGAGCCTGAGAACCGTACAAGATTATGGTATCATTATGACGTGCTGGGTGTGCTGACAAATAGCACTGGGACGAAAGCTATCAAGGGACTAGCTTTAAATATGTCAAAGAACAATTCAGTATCCTTCAATGCAAAAGCATTTAAGAAGATGCATAAGCTTTATTTGCTACAGCTTAATCATGTACAACTTGCAGGAGACTACAATTATCTATCAACAGAGTTGAGATGGCTTTGTTGGCATGGATTTACCTTGGAGAACTTGCCAATGAATTTATGCCTAAAAAAAATAGTTGCCATTGACTTAAAGTGGAGTAATCTCATAAAAGTATGGAAGAAATGTCAGCTGTTGGAGGGGTTGAAAATTCTTAATCTGAGTCATTCTCATTACTTGACAAAAACACCAAAGTTTTCAAAGTTACCATGTCTTGAAAAGCTAGTACTCAAAGATTGTCCGCATCTGTCAATAATTCACCCTTCCATTGGTGATCTTAAATATATCATTTTATTAAATCTAAAGGACTGCAAAAGCCTCAAACACTTGCCAAGAAGTGTATATAAATTGAGATCCTTGAAGACCCTTAATCTTTGTGGTTGTTCAAAGATTGAAAAGCTACAAGAAGACATTGGGCAAATGGAATCTTTGACAACTTTGATTGCTAATCAAACTGCTATAGCACAGGTGCCATTCTCGTTAGTGAGATTGAAAAGCATTAAATATGTGTCTTTATGTGGTTATGAAGGACTATCTCGTGATGTATTTCCGTCTGTTGTTTTGTCTTGGATGTCACCAACACATCGTTCAAAGTCCTTGTCTCGGGCATTTCAGATCTTACCATCTTTAATTAGGAATATATCACATCCTTTATTTGCTAGAAGCATTGAAAGTTTTGAACCAAGGCCAAGTGCAGCTCAAGCTTTATGTCGAAAAGCTCCAACATTAATGGAATGTCATGGGCAAATTCCCACCAAAAGGTTAGAAACATTTACGAGTTCTCTAACTATTCATGTTGGCTGCTTCAACAAAGTTGCTGATTCACTTATGAAGAGTATTTCACAGGGATGGAATGATGATCGGCTTGACTTTTCTCTTCCTAAAGACAATCATCCAGATTGGCTAGTTTTTGTAAATGAAGGATCTTCAGTTTCATTTAAAGTTCCTCAAGTTGTTGGCCGTCACTTAGAAGGAGTGGTCCTCTGTGTTATCTATTCTTCCCTTCAAGATAGCAGGGCATCTGTGTATCCCATCGGCATTATGATAAAGAATTTCACCAAAGGTACCATGGATTTCTACAAGCGAGATGCTGGAACCACTTCTACAGATAAAGAATGGCAGAGCATAACATCTAATTTGGAGCCTGGAGATGACATGGAAGTTAAAGTTGAATTTGCGCATATATATATTATGAAGAAGACTGCAATATATCTTCTATATGTTGAAGAAAGCAACGAACTGAGCATCACCGAGTTAAGATTTGCTTATAGGCATTCTAATGATCTTCTGAGCTCTAGAAGCCATCTTGGGGGGACTCAACGAAGGATTATTGAACAACTTCAAAGCTTGAACTACATCATTGTTGGGAGGCTGGAATTCACTCAAACAAAATCAAGGGGTTTGAAGAGGGATATATGTTGA 3846 0.3786 MSFIASSSSNLEFSFEYDVFLTMSHPKHDVKAHLEKDLRDVGIKPLIDDQMEEFLMYEIVKCRMIVVVFTPEFDESDIFLKRLMNIRRCQKITNIKVSPVFCGLSEQQVREQLEGMDQRRLDTLNFDFDLDSGGFIVEAASLLNSARAIAEAASLSDLGDKISNLIAKIDKLDKYLFDVELFHDLQHHQAGLQRRLKELLEILQQKHITSEDRFIVGIWGDGGDITGVARSRPDKPKLKYSYDVFLSFRGEDTRKSFATHLYSALKQAGIDIYMDEERIERGEDISSSLLQAIESSKISVIILSKNYAGSSWCLQELKKIMECYKTTYQEVLPIFFDVRPSEVRKQTNSFGKAWEKLVKRTLSNGVENWKINSRRALIEVANLSGWDMHNYRTETELIDEVIETITKKLGDNRSLFVAHHPVGLKSRMQDILHLLRNKSKDVTIAGIWGMGGIGKTTISKAIYNQVGHGFEGKCFLANVREVWKQDNGPVYLQEQLLSDILKSRRRALSNVEMGKTLLEEMLCKKKVLVVLDDVNNEDQLHALCGSREWFGEGSRIIITTRDERLLKILRVIHVYTVKELDDNESLELFSWHAFKQATPEQDFTKLSRRVVSYSGGLPLALEILGSYLFDRETLIWKRALEKLQEIPNDQINEKLKISYDGLSDNKEKDVFLDICCFLVGKDKSYAIQILNGCGLHADIGINRLLELSLVKVGNKNKLEMHDLLRHMGREIIREQSPEEPENRTRLWYHYDVLGVLTNSTGTKAIKGLALNMSKNNSVSFNAKAFKKMHKLYLLQLNHVQLAGDYNYLSTELRWLCWHGFTLENLPMNLCLKKIVAIDLKWSNLIKVWKKCQLLEGLKILNLSHSHYLTKTPKFSKLPCLEKLVLKDCPHLSIIHPSIGDLKYIILLNLKDCKSLKHLPRSVYKLRSLKTLNLCGCSKIEKLQEDIGQMESLTTLIANQTAIAQVPFSLVRLKSIKYVSLCGYEGLSRDVFPSVVLSWMSPTHRSKSLSRAFQILPSLIRNISHPLFARSIESFEPRPSAAQALCRKAPTLMECHGQIPTKRLETFTSSLTIHVGCFNKVADSLMKSISQGWNDDRLDFSLPKDNHPDWLVFVNEGSSVSFKVPQVVGRHLEGVVLCVIYSSLQDSRASVYPIGIMIKNFTKGTMDFYKRDAGTTSTDKEWQSITSNLEPGDDMEVKVEFAHIYIMKKTAIYLLYVEESNELSITELRFAYRHSNDLLSSRSHLGGTQRRIIEQLQSLNYIIVGRLEFTQTKSRGLKRDIC 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1466 1281 ProSiteProfiles TIR domain profile. 240 409 IPR000157 GO:0007165
Acco07g1466 1281 Pfam TIR domain 242 411 IPR000157 GO:0007165
Acco07g1466 1281 Pfam TIR domain 17 113 IPR000157 GO:0007165
Acco07g1466 1281 SMART till_3 241 383 IPR000157 GO:0007165
Acco07g1466 1281 PRINTS Disease resistance protein signature 444 459 - -
Acco07g1466 1281 PRINTS Disease resistance protein signature 923 939 - -
Acco07g1466 1281 PRINTS Disease resistance protein signature 614 628 - -
Acco07g1466 1281 PRINTS Disease resistance protein signature 521 535 - -
Acco07g1466 1281 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 116 IPR035897 -
Acco07g1466 1281 SUPERFAMILY Toll/Interleukin receptor TIR domain 237 386 IPR035897 -
Acco07g1466 1281 Gene3D - 414 574 IPR027417 -
Acco07g1466 1281 SUPERFAMILY L domain-like 732 1018 - -
Acco07g1466 1281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 674 IPR027417 -
Acco07g1466 1281 Gene3D - 237 413 IPR035897 -
Acco07g1466 1281 Gene3D - 13 172 IPR035897 -
Acco07g1466 1281 Gene3D - 579 663 IPR042197 -
Acco07g1466 1281 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 242 986 IPR044974 GO:0006952
Acco07g1466 1281 Gene3D Ribonuclease Inhibitor 740 1021 IPR032675 -
Acco07g1466 1281 FunFam Disease resistance protein (TIR-NBS-LRR class) 238 411 - -
Acco07g1466 1281 Pfam NB-ARC domain 433 649 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1466 Acco-ChrAcco07 28148191 28156175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1466 242 992 WRKY Transcription Factor Family AT4G12020 30.253 2.03e-84 302