Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1459 ATGGAAGAAGACAAGTCAGTTGCACTTGATGCTATTATGAAGGAAGCTGTTGATCTGGAAAATATTCCTATTGAGGAAGTGTTTCAACATCTCAAATGCACAAAGGAAGGTTTGAGCTCTGAGGAAGCAAAGCAAAGGCTGGAGCTGTTTGGATATAATAAGCTAGAAGAAAAGAAAGAAAATAAAATACTGAAATTTTTGGGGTTCATGTGGAATCCATTGTCTTGGGTGATGGAAGCTGCTGCAATTATGGCCATTGCCATGGCCCATGGAGATGGCGAGCCTGGAGATTATCAAGACTTTGTTGGCATAGTGTTGTTGCTTCTGATAAACTCAACCATAAGCTTCATAGAAGAAAACAATGCTGGAAATGCTGCTGCTGCACTTATGGCTCGTTTGGCCCCAAAAGCTAAGGTACTGCGTGATGGAAAGTGGAGTGAAGAGGATGCTTCAGTGTTGGTTCCTGGAGACATAGTTAGCATCAAGCTTGGTGACATTATTCCTGCAGATGCTCGTCTTCTTGAAGGAGATCCTTTAAAGATTGACCAATCTGCTCTGACTGGAGAGTCACTTCCAGTGACAAAAAATCCTGGAGATGGAGTATATTCTGGCTCAACTTGCAAGCAAGGAGAAATAGAAGCTGTAGTTATTGCTACTGGGGTCCACACTTTCTTTGGCAAAGCAGCTCATCTTGTGGAAAATACCACACATATAGGACACTTCCAGAAGGTTCTGACATCCATTGGGAACTTCTGCATTTGCTCGATCGCCGTCGGGATGGTTATAGAAATGATCGTGATTTGGGGCCCTCAAAAGAGAACTTACCGAAAAGGAATCGATAACCTCCTCGTGCTGCTCATTGGTGGTATCCCAATTGCAATGCCAACTGTTCTTTCTGTTACAATGGCTATTGGTGCACACAAATTGTCACGACAGGGTGCCATCACAAAGAGGATGACAGCCATTGAAGAAATGGCTGGAATGGATGTGCTATGCAGTGACAAAACAGGCACATTGACTCTTAACAAGCTTTCTGTGGACAAGAATTTGATTGAGCATCTATGGCAGGTTTTTGCCAGAGGTGTTGACAAGGACATGGTTGTTCTTATGGCTGCAAGAGCATCAAGGACAGAGAATCAAGATGCGATCGATGGTGCCATGGTTGCCATGTTATCTGATCCAAAAGAGGCAAGAGCCGGAATAAAAGAAGTTCATTTCCTTCCATTTAATCCAACTGATAAAAGAACTGCACTCACATATATTGATGCTGATGGTAAGATGCAGAGAGTTAGTAAAGGTGCACCAGAACAGATTCTCAATCTCGCACGTAACAAAGCTGAAATTGCCCAGAGGGTTCATGCCATTATTGACAACTTTGCAGAACGTGGATTACGGTCTCTTGCAATAGCCCGGCAGGAAGTACCTGAAGGAACTAAGGAAAGTGCAGGAGGCCCCTGGGAATTTGTTGGCCTTCTTCCACTTTTCGATCCTCCTCGCCATGATAGTGGAGAAACAATCGAAAGAGCTCTGAATCTTGGTGTGAGTGTCAAAATGATAACAGGAGATCAACTTGCAATTGCAAAGGAAACAGGAAGGCGTCTAGGAATGGGTACTAACATGTATCCTTCTTCATCTCTTCTTGGAGAACACAAAGGTGAAACACTTGAGTCTCTCCCAATTGATGAGCTCATTGAGAATGCTGATGGATTTGCTGGTGTCTTCCCTGAACACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAACACATTTGTGGGATGACTGGTGATGGTGTAAATGATGCTCCTGCCTTGAAGATTGCTGACATAGGTATAGCCGTAGCAGATGCCACCGATGCTGCTCGTGGCGCATCTGACATAGTTCTAACAGAACCCGGATTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGCGCTATCTTCCAAAGGATGAAAAACTACACGATATATGCTGTATCTATCACTATACGTATTGTGCTGGGCTTCATGCTATTGACCTGCTTCTGGAAATTTGACTTCCCTCCCTTCATGGTTCTTATAATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGAGTTAAGCCTTCACCAACACCTGATAGTTGGAAGCTCAGTGAAATTTTTGCAACTGGGATTGTCCTTGGAAGCTATTTGGCTGTAATGACTGTCATATTCTTCTGGGCAGCTTATGAAACTGACTTTTTCCATAAGCATTTTCATGTGGAAAACTTCAATTCAAACCAATTCAACACGACAGAAGATGTAAGGGTACTGAATGAGAAGGTGGCATCTGCAGTGTATCTTCAAGTCAGTGTCATCAGTCAAGCTTTAATCTTTGTAACTCGCTCTCGAGGATGGTCTTACACCGAACGACCTGGTCTTTTGCTCGTTATCGCCTTCATTATTGCTCAGCTGATTGCCACAGTTTTATCTGCCACTGTGACCTGGAATGTTGCTGGAATCAGAAAAATAGGTTGGGGCTGGACAGGAGTTATTTGGCTATACAACCTTCTAACCTATATATTGTTGGATCCTATAAAATTTGCTGTCCGTTATGCATTAAGTGGAAGGGCTTGGAATTTGGTCGTAAACCAGAGAACTGCATTTACCAACAAAAACAACTTCGGAAGAGGAGCTCGTGAGGCGGCATGGGCTGCAGAGCAGAGAACCCTGCACGGCCTTCAGTCTGCTACTGATTCAAAGATATTTGCAGAGAAACACACATTCAGAGAAATCAATACAATTGCAGAAGAGGCTAAGAGAAGAGCTGAAATAGCAAGGATGAGAGAGCTTCACACTTTGAAAGGAAAAGTGGAATCATTTGCCAAGTTAAGGGGTTTGGACGTTGATATTAATGCGCACTACACTGTCTAA 2907 0.431 MEEDKSVALDAIMKEAVDLENIPIEEVFQHLKCTKEGLSSEEAKQRLELFGYNKLEEKKENKILKFLGFMWNPLSWVMEAAAIMAIAMAHGDGEPGDYQDFVGIVLLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHIGHFQKVLTSIGNFCICSIAVGMVIEMIVIWGPQKRTYRKGIDNLLVLLIGGIPIAMPTVLSVTMAIGAHKLSRQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEHLWQVFARGVDKDMVVLMAARASRTENQDAIDGAMVAMLSDPKEARAGIKEVHFLPFNPTDKRTALTYIDADGKMQRVSKGAPEQILNLARNKAEIAQRVHAIIDNFAERGLRSLAIARQEVPEGTKESAGGPWEFVGLLPLFDPPRHDSGETIERALNLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGEHKGETLESLPIDELIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLTCFWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLSEIFATGIVLGSYLAVMTVIFFWAAYETDFFHKHFHVENFNSNQFNTTEDVRVLNEKVASAVYLQVSVISQALIFVTRSRGWSYTERPGLLLVIAFIIAQLIATVLSATVTWNVAGIRKIGWGWTGVIWLYNLLTYILLDPIKFAVRYALSGRAWNLVVNQRTAFTNKNNFGRGAREAAWAAEQRTLHGLQSATDSKIFAEKHTFREINTIAEEAKRRAEIARMRELHTLKGKVESFAKLRGLDVDINAHYTV 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1459 968 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Acco07g1459 968 PRINTS P-type cation-transporting ATPase superfamily signature 490 501 - -
Acco07g1459 968 PRINTS P-type cation-transporting ATPase superfamily signature 618 630 - -
Acco07g1459 968 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Acco07g1459 968 PRINTS P-type cation-transporting ATPase superfamily signature 595 614 - -
Acco07g1459 968 PRINTS P-type cation-transporting ATPase superfamily signature 512 522 - -
Acco07g1459 968 PRINTS H+-transporting ATPase (proton pump) signature 567 583 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g1459 968 PRINTS H+-transporting ATPase (proton pump) signature 626 651 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g1459 968 PRINTS H+-transporting ATPase (proton pump) signature 452 470 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g1459 968 PRINTS H+-transporting ATPase (proton pump) signature 778 799 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g1459 968 PRINTS H+-transporting ATPase (proton pump) signature 595 611 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g1459 968 FunFam Plasma membrane ATPase 488 643 - -
Acco07g1459 968 Gene3D - 97 832 - -
Acco07g1459 968 Gene3D - 135 219 - -
Acco07g1459 968 FunFam Plasma membrane ATPase 344 495 - -
Acco07g1459 968 Pfam Cation transporter/ATPase, N-terminus 21 84 IPR004014 -
Acco07g1459 968 FunFam Plasma membrane ATPase 135 219 - -
Acco07g1459 968 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Acco07g1459 968 Pfam haloacid dehalogenase-like hydrolase 328 609 - -
Acco07g1459 968 Pfam E1-E2 ATPase 133 312 - -
Acco07g1459 968 Gene3D - 329 632 IPR023214 -
Acco07g1459 968 SFLD p-type atpase 314 646 IPR044492 -
Acco07g1459 968 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Acco07g1459 968 PANTHER CALCIUM-TRANSPORTING ATPASE 20 901 - -
Acco07g1459 968 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Acco07g1459 968 NCBIfam plasma-membrane proton-efflux P-type ATPase 37 823 IPR006534 GO:0008553|GO:0016020|GO:0120029
Acco07g1459 968 FunFam ATPase 4 plasma membrane-type 579 833 - -
Acco07g1459 968 NCBIfam HAD-IC family P-type ATPase 104 351 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g1459 968 NCBIfam HAD-IC family P-type ATPase 570 675 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco07g1459 968 SUPERFAMILY HAD-like 328 642 IPR036412 -
Acco07g1459 968 Gene3D - 918 968 - -
Acco07g1459 968 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 865 IPR023298 -
Acco07g1459 968 SFLD Haloacid Dehalogenase 314 646 - -
Acco07g1459 968 CDD P-type_ATPase_H 37 859 IPR006534 GO:0008553|GO:0016020|GO:0120029
Acco07g1459 968 Gene3D - 344 495 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1459 Acco-ChrAcco07 27914699 27924556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1459 8 968 Primary Pumps ATPases AT3G60330 79.193 0.0 1543
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g1459 07 27914699 27924556 Acco07g1459 07 27914699 27924556 ECH