Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1454 ATGATCCCCAATCATCTTTCTCCTTTAGATTCAGTTCAACAGTACCTTCTTCAAGATGATCCTTCCTCTATGATTCTCACGAATATCTTCTTCACGTCGAATAATAACCCAACTTTTAGCCCTATCTCCTATGTTTCTTTGCCAGAGCAGGGTGGTAGTAGCTCCAGTGGCACGGTGTTTTCCGGTGAGCATGACAATGCCATGAAACCTCCTGCAGCTGACAGTAACAATACAGGATCTGTGGCGCGTAAAGTGAACGCGCCACACAGATGGAGTAGCTACCGGGGCGTGAGGCGGCGGCCCTGGGGGAAGTTTGCGGCGGAGATCCGGGACCCGAAGAGGAATGGAGCGAGGATATGGTTGGGAACTTATGAGAGGGAAGAGGATGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGCGTGGTCGTAAAGCCAAGCTTAATTTTCCACACCTCATTGGGTTGGAACCATTACCGGAACCAGCAAGAGTAGTGGCCGGACAGAAGCGGCGCCACCCACCGGAACCTTCATGGCCGTCAGGGAATACATATGAGAATGATGCATGTCAAGGGTCAAGTAAGAGGAAGAACCTAGCTGGTCTATTGAATAAGTTAGCAACAAATGGAACTCTAAGTCAGAAGCTTGAAATAGTTTTCATGAAGGCATAG 672 0.4866 MIPNHLSPLDSVQQYLLQDDPSSMILTNIFFTSNNNPTFSPISYVSLPEQGGSSSSGTVFSGEHDNAMKPPAADSNNTGSVARKVNAPHRWSSYRGVRRRPWGKFAAEIRDPKRNGARIWLGTYEREEDAALAYDRAAFKMRGRKAKLNFPHLIGLEPLPEPARVVAGQKRRHPPEPSWPSGNTYENDACQGSSKRKNLAGLLNKLATNGTLSQKLEIVFMKA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1454 223 FunFam Ethylene-responsive transcription factor 2 92 152 - -
Acco07g1454 223 SUPERFAMILY DNA-binding domain 92 152 IPR016177 GO:0003677
Acco07g1454 223 Gene3D AP2/ERF domain 93 152 IPR036955 GO:0003700|GO:0006355
Acco07g1454 223 PANTHER DNA-BINDING DOMAIN 70 176 IPR044808 GO:0003700|GO:0009873
Acco07g1454 223 SMART rav1_2 93 157 IPR001471 GO:0003700|GO:0006355
Acco07g1454 223 Pfam AP2 domain 93 143 IPR001471 GO:0003700|GO:0006355
Acco07g1454 223 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Acco07g1454 223 PRINTS Ethylene responsive element binding protein signature 133 153 IPR001471 GO:0003700|GO:0006355
Acco07g1454 223 ProSiteProfiles AP2/ERF domain profile. 93 151 IPR001471 GO:0003700|GO:0006355
Acco07g1454 223 MobiDBLite consensus disorder prediction 53 80 - -
Acco07g1454 223 CDD AP2 92 153 IPR001471 GO:0003700|GO:0006355
Acco07g1454 223 MobiDBLite consensus disorder prediction 165 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1454 Acco-ChrAcco07 27773084 27773755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1454 69 178 AP2-EREBP Transcription Factor Family AT2G44840 63.636 8.50e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco07g1454 AP2 6.1e-14 CL0081