Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1451 ATGAACCCTAGTTTTTCTCCTTTCGAATCATCACTTCAACAATATCTGATTGAAGATGATGATCCATCCTCCATGACTCTCATTAATGGCTTATTCATGGGCGACCCTACTTGGAATTTGAGCTTTGACGATGCCAATTTGCCAGAGCAGGGCGTTAGTAACTCCGGTGGTACAGTGTTTTCCAGCGCGAATGACGACAACAATGCTATAAATCCAGGTGAATATGATGGCATTGTAAATGGTAATAATAACACAGGATCTGTGGCTTGTGAGAAGAACGTGGCACCTAGATGGAGGAATTACCAAGGCGTGAGGCGGCGGCCATGGGGGAAGTTCGCGGCTGAGATTCGTGACTCGAATAGGAACGGGGCGAGGACATGGCTGGGAACCTATGAGAGGGAGGAGGACGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGAAGAAGGGTAGAAAAGCCAAGGTCAATTTTCCACACCTCATTGGGTCGGAACCACCACCAGAGCCAGAAAGAGTAGTCACTGGGCAGAAGCGCCGCCGCCTTCATCAGAAAGAAAGGTCAGCAAGCTGGTCAACCAAATAA 582 0.4828 MNPSFSPFESSLQQYLIEDDDPSSMTLINGLFMGDPTWNLSFDDANLPEQGVSNSGGTVFSSANDDNNAINPGEYDGIVNGNNNTGSVACEKNVAPRWRNYQGVRRRPWGKFAAEIRDSNRNGARTWLGTYEREEDAALAYDRAAFKKKGRKAKVNFPHLIGSEPPPEPERVVTGQKRRRLHQKERSASWSTK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1451 193 Pfam AP2 domain 100 150 IPR001471 GO:0003700|GO:0006355
Acco07g1451 193 SMART rav1_2 100 164 IPR001471 GO:0003700|GO:0006355
Acco07g1451 193 PRINTS Ethylene responsive element binding protein signature 101 112 IPR001471 GO:0003700|GO:0006355
Acco07g1451 193 PRINTS Ethylene responsive element binding protein signature 140 160 IPR001471 GO:0003700|GO:0006355
Acco07g1451 193 Gene3D AP2/ERF domain 99 159 IPR036955 GO:0003700|GO:0006355
Acco07g1451 193 PANTHER DNA-BINDING DOMAIN 72 174 IPR044808 GO:0003700|GO:0009873
Acco07g1451 193 MobiDBLite consensus disorder prediction 157 193 - -
Acco07g1451 193 ProSiteProfiles AP2/ERF domain profile. 100 158 IPR001471 GO:0003700|GO:0006355
Acco07g1451 193 SUPERFAMILY DNA-binding domain 101 159 IPR016177 GO:0003677
Acco07g1451 193 CDD AP2 100 160 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1451 Acco-ChrAcco07 27701950 27702531 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1451 95 182 AP2-EREBP Transcription Factor Family AT2G44840 56.311 6.31e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco07g1451 AP2 2.8e-11 CL0081