Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1450 ATGATCCCAAACAATCCATCTTCTTTTGAAGTTCATCAAAAATACGATCATGATCATATTCCTTCATCGACCACTCTCATGAATAGTGTCTTCTTCACGTCAAGGTCTACTACTACTACTTCAAATCCTAACTGCGTCGGCAGTGCTTCGTTTGATGAGCAGTCTCTAAGTAACTCCAACGGCGTGGTATTTTTCCATGAATCGGACCCCATGAAACCAGGTGGTGGTGCTGGTGATGGGGCTAATAATAATGTCAATAGCAGTGCAGAATCTATGGCGCGTGAAGTGAACGCGCCACCCAGATGGAGGAATTACAGAGGCGTGAGGCGTCGGCCGTGGGGAAAGTTCGCAGCTGAGATCCGTGACCCAAAGAGGAATGGCGCAAGAACATGGTTAGGGACATATGAGACAGAAGAGGATGCGGCTTTGGCTTATGATAGAGCTGCTTTTAAGATAAGAGGTAGCAAAGCCAAGCTCAATTTTCCACACCTTGCTGGGTCGGAATCACTGCCGGAGCCGGCAAGAGTAGTCAGTCACAAGAAGCGGTGCCACTCGCCAGAATCTTCAATGCCATCAGGGTGTGCTTCTGAGGATGGTGAATCTCAAGTGTCAAGTAATAAGAAGAGCCTGACTACTGCTTGTCTATTGAATAAGTTAGCAGCAAGTAGAAGCCAACGAGGTCCTTTGAGGATGGCGAGGCATGGTGACAGCAAGGACGACGACAACAAACGATGCTGGAGGACCAACTTCTTCAAACCACAATCATCCTTCCGCCGCAAGCCACAATCGTCAAATCTGGTTTTACTCCGCCGTCCGAGTTTCCTTCTTTTGTTTTCAAAGTGCTTGCCTAGTTCCTCCACCTTCCCTCATTGTTTCAAAGTCCTTGCCCTCTACTCCTTCACCATCACCATCACCGACATCCAACGTGGCCACCGTCCCAGACATGGCGGGAGTTTCTAA 960 0.4854 MIPNNPSSFEVHQKYDHDHIPSSTTLMNSVFFTSRSTTTTSNPNCVGSASFDEQSLSNSNGVVFFHESDPMKPGGGAGDGANNNVNSSAESMAREVNAPPRWRNYRGVRRRPWGKFAAEIRDPKRNGARTWLGTYETEEDAALAYDRAAFKIRGSKAKLNFPHLAGSESLPEPARVVSHKKRCHSPESSMPSGCASEDGESQVSSNKKSLTTACLLNKLAASRSQRGPLRMARHGDSKDDDNKRCWRTNFFKPQSSFRRKPQSSNLVLLRRPSFLLLFSKCLPSSSTFPHCFKVLALYSFTITITDIQRGHRPRHGGSF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1450 319 Gene3D AP2/ERF domain 103 163 IPR036955 GO:0003700|GO:0006355
Acco07g1450 319 MobiDBLite consensus disorder prediction 182 202 - -
Acco07g1450 319 SUPERFAMILY DNA-binding domain 104 163 IPR016177 GO:0003677
Acco07g1450 319 PANTHER DNA-BINDING DOMAIN 59 209 IPR044808 GO:0003700|GO:0009873
Acco07g1450 319 SMART rav1_2 104 168 IPR001471 GO:0003700|GO:0006355
Acco07g1450 319 PRINTS Ethylene responsive element binding protein signature 144 164 IPR001471 GO:0003700|GO:0006355
Acco07g1450 319 PRINTS Ethylene responsive element binding protein signature 105 116 IPR001471 GO:0003700|GO:0006355
Acco07g1450 319 FunFam Ethylene-responsive transcription factor 2 103 163 - -
Acco07g1450 319 ProSiteProfiles AP2/ERF domain profile. 104 162 IPR001471 GO:0003700|GO:0006355
Acco07g1450 319 CDD AP2 104 164 IPR001471 GO:0003700|GO:0006355
Acco07g1450 319 Pfam AP2 domain 104 154 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1450 Acco-ChrAcco07 27661126 27666223 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1450 105 215 AP2-EREBP Transcription Factor Family AT2G44840 64.286 5.01e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco07g1450 AP2 1.3e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g1450 07 27661126 27666223 Acco07g1450 07 27661126 27666223 ECH