Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1449 ATGAACCCTAGTTTTTCTCCTTTCGAATCATCAGTTCAACAATATCTGATTGAAGGTGATGATCCTTCTTCCATGACTCTCATTAATGGCTTATTCATGGGCGACCCTACTTGGAATTTGAGCTATGACGCTGCAAATTTTCTGGAGCAGGGTGTTAGTAACTCTGACGGTACGGTGTTTTCTGGCACAAATGACAACAACAATGCTATAAATCCAGGTGGATATGATAGTCTTGTGAATGGTAATAATAACACAGGATCTGTGGTTTGTAAGAAGAACGCGGCACCTAAATGGAGGAATTACCGAGGTGTGAGGCGGCGGCCATGGGGGAAGTTCGCGGCTGAGATTCGGGATCCGAATAGGAATGGGGCGAGGACATGGCTGGGAACCTATGAGAGGGAGGACGATGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGAAGGGTAGAAAAGCCAAGCTCAATTTTCCACACCTCATTGGGTCGGAACCACTACCGGAGCCAGCCAGAGTAGTCGCTGGGCAGAAGCGGCGCCACCTTCATCAGGAAGAAAGGTCAGCAGGCTGGTCAACCAAATAA 582 0.4777 MNPSFSPFESSVQQYLIEGDDPSSMTLINGLFMGDPTWNLSYDAANFLEQGVSNSDGTVFSGTNDNNNAINPGGYDSLVNGNNNTGSVVCKKNAAPKWRNYRGVRRRPWGKFAAEIRDPNRNGARTWLGTYEREDDAALAYDRAAFKMKGRKAKLNFPHLIGSEPLPEPARVVAGQKRRHLHQEERSAGWSTK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1449 193 SMART rav1_2 100 164 IPR001471 GO:0003700|GO:0006355
Acco07g1449 193 SUPERFAMILY DNA-binding domain 100 159 IPR016177 GO:0003677
Acco07g1449 193 PRINTS Ethylene responsive element binding protein signature 140 160 IPR001471 GO:0003700|GO:0006355
Acco07g1449 193 PRINTS Ethylene responsive element binding protein signature 101 112 IPR001471 GO:0003700|GO:0006355
Acco07g1449 193 PANTHER DNA-BINDING DOMAIN 77 173 IPR044808 GO:0003700|GO:0009873
Acco07g1449 193 Gene3D AP2/ERF domain 99 159 IPR036955 GO:0003700|GO:0006355
Acco07g1449 193 MobiDBLite consensus disorder prediction 173 187 - -
Acco07g1449 193 FunFam Ethylene-responsive transcription factor 2 99 159 - -
Acco07g1449 193 ProSiteProfiles AP2/ERF domain profile. 100 158 IPR001471 GO:0003700|GO:0006355
Acco07g1449 193 MobiDBLite consensus disorder prediction 164 193 - -
Acco07g1449 193 CDD AP2 100 160 IPR001471 GO:0003700|GO:0006355
Acco07g1449 193 Pfam AP2 domain 100 150 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1449 Acco-ChrAcco07 27644658 27645239 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1449 97 187 AP2-EREBP Transcription Factor Family AT2G44840 60.377 1.85e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco07g1449 AP2 9.2e-12 CL0081