Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1444 ATGTCCCAATTTTTCCACCATCCCTCACCTGATTCTACTCAACATTCTTCCAGTACTTTAGAAGCAATCCGACATCACCTTCTCGGTAACGAAATGGCCGACTTGCCACGGCTAGATTCTCTGGCAGCAGCCTCCGATGACATCACGGTTCACGGCCAGAGCCCGCCATCTTATGACAGTTGTTATATCAATGAACTAGCTCCACAAGTTTGCACCATTGATGATAACAATATACAAATAGAATATGCAGTGGCAGCGCATAGTGATGAGTATTGTAATGTCCCGCCACCAGTTCAGCAGCAGGGATACCGGGGTGTTAGGCGGCGGCCATGGGGGAAATACGCAGCGGAGATCAGGGATCCGGCGAAAAATGGTGCTAGGGTTTGGCTTGGAACTTATGATACGGCGGAGGATGCAGCTATAGCTTATGATCGTGCGGCTTATGAGATGCGTAGAGCTAAAGCCAAGCTTAATTTTCCTCACCTTATAGGCTCAAATGTGTGGGAGTCAGTTCAAGCCACTCGGAAGCGGTGCGACCTCATCATGGCCGGAGGTAGCAGCGGGAAGGAGGGTTCTTCAAAGCTTAAGCGAAGGAAGCGTGAGTCGTGA 609 0.5008 MSQFFHHPSPDSTQHSSSTLEAIRHHLLGNEMADLPRLDSLAAASDDITVHGQSPPSYDSCYINELAPQVCTIDDNNIQIEYAVAAHSDEYCNVPPPVQQQGYRGVRRRPWGKYAAEIRDPAKNGARVWLGTYDTAEDAAIAYDRAAYEMRRAKAKLNFPHLIGSNVWESVQATRKRCDLIMAGGSSGKEGSSKLKRRKRES 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1444 202 MobiDBLite consensus disorder prediction 182 202 - -
Acco07g1444 202 Gene3D AP2/ERF domain 102 161 IPR036955 GO:0003700|GO:0006355
Acco07g1444 202 ProSiteProfiles AP2/ERF domain profile. 102 160 IPR001471 GO:0003700|GO:0006355
Acco07g1444 202 CDD AP2 103 162 IPR001471 GO:0003700|GO:0006355
Acco07g1444 202 PANTHER DNA-BINDING DOMAIN 67 175 IPR044808 GO:0003700|GO:0009873
Acco07g1444 202 SMART rav1_2 102 166 IPR001471 GO:0003700|GO:0006355
Acco07g1444 202 Pfam AP2 domain 102 152 IPR001471 GO:0003700|GO:0006355
Acco07g1444 202 FunFam Ethylene-responsive transcription factor 2 101 161 - -
Acco07g1444 202 SUPERFAMILY DNA-binding domain 102 161 IPR016177 GO:0003677
Acco07g1444 202 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Acco07g1444 202 PRINTS Ethylene responsive element binding protein signature 126 142 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1444 Acco-ChrAcco07 27492081 27492689 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1444 27 177 AP2-EREBP Transcription Factor Family AT2G44840 45.395 8.15e-37 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco07g1444 AP2 2.2e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g1444 07 27492081 27492689 Acco07g1444 07 27492081 27492689 ECH