LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco07g1441	ATGGAGAGGATTTCAGAGCCAAAGACACTTCATCGAACGTTGCCTGTTCTAGTCGAGGTATCAAATCCACACACAACTACAACAAGGAGAGATGGTCAGTTGTCAAATTCACAGGATATTTCGGGTATGCGGGGGATTTCAGTTAGAGAAGTCCATCAATTGTCAAAAGCACAGGATAGGTCGATCACTCGGCTGGCCTCCATCAGAGAAGTGGCTCAGCTATCAAATGCCCGGCTAGTTTTGATTAGAGATGACATAGGATTTGATGGTCAAGGCTCTCACGAGCCTGTTCACTTTGCCCCTGCAAGAACATGGAAAGGAAAGGCATCTTTGCCAGAATCAGAAGAAATTATATCTGATGTTGATGCATTAAAGGGGAGCTTTGATTTATTTGAAGAAGGAGGCCCGAGTTCATTTGCTGGTGCAAGTCACCCCCCTGAACCTGTTGATATGGATCTCATGAGAACAGTTTATGTACCAATAGGTCAAAACAAATCTGAGGCTGGAGGCTTAATGAAGAGCTTTTCTGTGAAGGGTTCTTCCCTAGAAGATCTCTCAATTCGTGTTCCACCTAAAAAACCAAGCCCGGCTGTTCTTTCCCCAGCAGAAAGTCAAGTTGAAGATCAAAGTGATATGAGGAACTTGCCCTCTCCAGTTTTGGGTCCTCGTACGTCACAGAATACTGATCACTCTCTCATTCCTCCAGATTCCGATGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGTGGAAATGTCAGTCCGCTTAGTAGTATTGATAGTACTGGCGTTGTCACAGCAATGAGCATTGCTAATAGTTGTGCAAGTACATACCAGAGTGATGCACTCACTAGTGACGGCATGCTTAGTTTAGATAGGAACTTTGATAGTACTAAGGGGAGTGTGCGGGGTGATTCTCTAGAGAGTACAAAAACTAGTGCTAGTCAAGCGAGTGATAGCAGTGGGTTCAGTGATGACAGCAACTGGAGCAATGTAACAAGCAGTGCCAATAAGCCTCACAAAGGAAATGATCCTCGGTGGAAGGCTATCCTCGCCATCCGATCTCGGGATGGGATTTTGGGCATGAGTCATTTTAAGCTTCTCAAAAGACTTGGTTGTGGTGATATCGGAAGTGTATATCTCTCGGAGTTGAGTGCAACTCGGTGTTATTTTGCGATGAAAGTCATGGACAAGGCATCACTAGCAGCCAGAAAGAAGCTGACTAGGGCACAAACTGAAAGGGAGATATTGCAGCTGCTTGACCACCCATTTCTGCCAACTTTGTATACTCATTTTGAGACAGACAGATTTTCCTGTTTGGTGATGGAATACTGTCCTGGAGGTGACCTACACACCTTAAGGCAACGTCAACCTGGTAAACATTTCTCAGAGTATGCTGCTCGTTTCTATGCCGCGGAGGTTCTTTTAGCACTTGAATATCTCCACATGCTTGGAGTAGTGTATCGAGACCTTAAACCTGAAAACGTGCTGGTCCGAGATGATGGTCACATTATGCTTTCGGACTTTGATCTCTCCCTTAGATGTGCTGTTTCACCAACATTGATCAGAATGTCTGATGGTGACCCTAAACGAGGCGGTGGTGCATTTTGTGTTCAGCCTGCTTGTACTGAGCCTTCATCGGTATGCATCCAGCCTGCCTGCTTCATCCCTCGGTTCTTCCCTCAGAAAAACAAGAAATCACAGAAGCCTAAAGCTGATTCAGGGTTATCAGCCAACACGCTTCCTGAGCTTGTGGCTGAGCCCACCTCGGCTCGGTCCATGTCCTTTGTTGGAACCCACGAATACCTTGCTCCTGAAATCATCAAAGGAGAAGGTCATGGCAGTGCAGTGGATTGGTGGACATTTGGGATTTTCCTGCACGAGCTCTTATACGGTAAAACGCCTTTCAAAGGATCAGGGAATCGTGCTACATTGTTCAATGTTGTTGGCCAGCAGCTCAAATTTCCTGAGTCACCGGCCACTAGCTATGCTAGCCGGGATCTGATCCGAGGCTTGCTGGTGAAGGAACCACAGAACCGGCTAGGAGTAAAGAGAGGTGCAACTGAGATCAAGCAGCATCCCTTCTTTGAGGGTGTGAATTGGGCTTTGATTAGGTGCAGCACGCCCCCAGAAGTGCCCAGACCAGTTGAGAGCGAGATTCCTGGGGCCGTAAGATTTGGACCGCCGGATACAGTTGGCAACAATAGCAAGAGGATGGTAGGTACTGATATGAAGTCTGGTGGGGGTAAATATCTAGACTTCGAGTTCTTCTAG	2277	0.4668	MERISEPKTLHRTLPVLVEVSNPHTTTTRRDGQLSNSQDISGMRGISVREVHQLSKAQDRSITRLASIREVAQLSNARLVLIRDDIGFDGQGSHEPVHFAPARTWKGKASLPESEEIISDVDALKGSFDLFEEGGPSSFAGASHPPEPVDMDLMRTVYVPIGQNKSEAGGLMKSFSVKGSSLEDLSIRVPPKKPSPAVLSPAESQVEDQSDMRNLPSPVLGPRTSQNTDHSLIPPDSDEKECVWDASLPPSGNVSPLSSIDSTGVVTAMSIANSCASTYQSDALTSDGMLSLDRNFDSTKGSVRGDSLESTKTSASQASDSSGFSDDSNWSNVTSSANKPHKGNDPRWKAILAIRSRDGILGMSHFKLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLAARKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRMSDGDPKRGGGAFCVQPACTEPSSVCIQPACFIPRFFPQKNKKSQKPKADSGLSANTLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQNRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVESEIPGAVRFGPPDTVGNNSKRMVGTDMKSGGGKYLDFEFF	758

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco07g1441	758	MobiDBLite	consensus disorder prediction	299	343	-	-
	Acco07g1441	758	PANTHER	FLIPPASE KINASE 1-RELATED	144	719	-	-
	Acco07g1441	758	SMART	serkin_6	366	697	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco07g1441	758	Pfam	Protein kinase domain	594	697	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco07g1441	758	Pfam	Protein kinase domain	367	516	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco07g1441	758	FunFam	serine/threonine-protein kinase D6PK-like	450	517	-	-
	Acco07g1441	758	ProSiteProfiles	Protein kinase domain profile.	366	697	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco07g1441	758	MobiDBLite	consensus disorder prediction	299	341	-	-
	Acco07g1441	758	Gene3D	Transferase(Phosphotransferase) domain 1	450	516	-	-
	Acco07g1441	758	Gene3D	Transferase(Phosphotransferase) domain 1	591	714	-	-
	Acco07g1441	758	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	487	499	IPR008271	GO:0004672\|GO:0006468
	Acco07g1441	758	SUPERFAMILY	Protein kinase-like (PK-like)	346	722	IPR011009	-
	Acco07g1441	758	FunFam	serine/threonine-protein kinase D6PK-like	592	715	-	-
	Acco07g1441	758	FunFam	Serine/threonine-protein kinase D6PK-like	364	449	-	-
	Acco07g1441	758	CDD	STKc_phototropin_like	364	716	-	-
	Acco07g1441	758	MobiDBLite	consensus disorder prediction	186	238	-	-
	Acco07g1441	758	Gene3D	Phosphorylase Kinase; domain 1	364	449	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco07g1441	Acco-ChrAcco07	27399559	27402612	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco07g1441	1	758	AGC Kinase Gene Family	AT2G44830	66.667	0.0	937

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Acco07g1441		Pkinase	1.6e-36	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Acco07g1441	07	27399559	27402612	Acco07g1441	07	27399559	27402612	ECH