Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1400 ATGAATGAGATATTGTACTGCTTGACGCTGTTCTTCATCTTAATACTTATATCCGTCATTCTGAGAGTAATATCCTATTGTTGCACCGCCATACAGTCCAACACAGCAAACCAATCATCACATGGTGGGGTTGATCATATCATTAATATTATTGATGCTACAGAGACGAACCAGACGGTGGTGACAACGACGGTGACTGTAGTAGTGGAGTCATCATGCTTGGCGGATCAAACTAGGGTTTTCAGTTCATCGCCATCATCATCAAAAGCCAATAATAATAAGTTGTGTGACGATAAAGAAGGTGGTGGTGATAATGGTGTTTCAAGTCCTTGTTGCTGCTCAATATGCTTGATGGATTACCAAGAATCTGATCTCTTACGAGTTCTTCCGGATTGCGGCCATTTCTTTCATGTCAAGTGCGTTGATCCTTGGTTCACTACGCATTTGACCTGCCCTATTTGTAGGACTTTGGTCAAGAATTTTCAAAACGTGCCCTCATCATCAAGCTAG 510 0.4176 MNEILYCLTLFFILILISVILRVISYCCTAIQSNTANQSSHGGVDHIINIIDATETNQTVVTTTVTVVVESSCLADQTRVFSSSPSSSKANNNKLCDDKEGGGDNGVSSPCCCSICLMDYQESDLLRVLPDCGHFFHVKCVDPWFTTHLTCPICRTLVKNFQNVPSSSS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1400 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 160 IPR013083 -
Acco07g1400 169 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Acco07g1400 169 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 158 IPR045899 -
Acco07g1400 169 Pfam Ring finger domain 113 155 IPR001841 -
Acco07g1400 169 SMART ring_2 113 154 IPR001841 -
Acco07g1400 169 SUPERFAMILY RING/U-box 112 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1400 Acco-ChrAcco07 26005563 26006072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1400 112 156 C3H Transcription Factor Family AT5G06490 66.667 4.48e-19 78.6