Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1399 ATGATAGACTGCCCCGCAAGGAAAACAGAACAACTCAATGAGATTCTGTTCATATATCTCTCATCATCCACAAATATTATGTATATACATACATCTCCTTGTCCCATACCAATCACTTTTCTAATTTTAGTATCATTCCGTTATGACTTGGTCCAACACAGCAAACCAGAATCACATGGTGGGGATGATCATAGCATTAATATTATCGATGCTACAGAGACGAACCAGACGGTGGTGACAACGACGGTGACTGTAGTAGTGGAGCCATCATGCTTGGAGTTGGTGGATCAAGCTAGGGTTTTCAGTTCATCATCATCATCTTCATCAAAAGCCAATAATAATAAGTTGTGTGATGATAAAGAAAATGATGGTGATAATGGTGTTTCAAGTCCCTGTCGCTGCTCAATATGCTGGATGGATTACCAAGACTCTGATCTCTTACGAGTTCTTCCTGATTGCGGCCATTTCTTTCATATCAAGTGCGTTGATCCTTGGTTCGCTATTCATTTGACCTGCCCTATTTGTAGGACTTTGGTCAAGAATGTTCAAAACGTGCCCTCATCAAGCTAG 570 0.407 MIDCPARKTEQLNEILFIYLSSSTNIMYIHTSPCPIPITFLILVSFRYDLVQHSKPESHGGDDHSINIIDATETNQTVVTTTVTVVVEPSCLELVDQARVFSSSSSSSSKANNNKLCDDKENDGDNGVSSPCRCSICWMDYQDSDLLRVLPDCGHFFHIKCVDPWFAIHLTCPICRTLVKNVQNVPSSS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1399 189 MobiDBLite consensus disorder prediction 104 128 - -
Acco07g1399 189 Pfam Ring finger domain 133 176 IPR001841 -
Acco07g1399 189 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 65 179 IPR045899 -
Acco07g1399 189 SUPERFAMILY RING/U-box 133 182 - -
Acco07g1399 189 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Acco07g1399 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 181 IPR013083 -
Acco07g1399 189 SMART ring_2 134 175 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1399 Acco-ChrAcco07 25999503 26000189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1399 134 177 C3H Transcription Factor Family AT5G06490 63.636 6.59e-17 73.6