Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1398 ATGGCGTCTTACTCGTTCTTGTGTGTTGTCTCTCTCCTCCTTTCTCTTCCTCCATACTCATCAGTCGCTACTCACATTCCTAAGCTTCCACCTCCGTCACATGGAACCATTGTCACCATCCTCAGTATTGACGGTGGTGGTCTCCGAGGCCTTATCCCCGCAGTTATTCTCCGACGCCTTGAAGCTCATCTTCAGGAAATAGCCAGCAATGAGCATTTAAGGATCGCAGACTGTTTTGATGTAATTGCTGGAACCAGCACTGGAGGACTCATTACTGAAATGCTTACAGCTCCAGACTCAAACAAGCAACCCTTGTTCGATGCTTCTCAAATAGTTCAATTCTACAAAGATGAAGCAGCCAACATTTTCCCGCCAAACACACCGTCAAATCTATTGAAGCCCAAGTACAGTAACGATTACTTGCGTCATATTACACAAAAGATGTTGAACCAAACAAGACTGAATGATACTTTGACGAATGTCGTTATCACAGCTTTCGACATGAAACAACTTTCGCCAACGCTATTCTCAAATTATAAGGTACTATTTAATATTTGTTCTTAA 564 0.4273 MASYSFLCVVSLLLSLPPYSSVATHIPKLPPPSHGTIVTILSIDGGGLRGLIPAVILRRLEAHLQEIASNEHLRIADCFDVIAGTSTGGLITEMLTAPDSNKQPLFDASQIVQFYKDEAANIFPPNTPSNLLKPKYSNDYLRHITQKMLNQTRLNDTLTNVVITAFDMKQLSPTLFSNYKVLFNICS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1398 187 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 41 187 IPR002641 GO:0006629
Acco07g1398 187 Pfam Patatin-like phospholipase 41 164 IPR002641 GO:0006629
Acco07g1398 187 Gene3D Cytosolic phospholipase A2 catalytic domain 31 184 - -
Acco07g1398 187 PANTHER XYLOSE ISOMERASE 27 180 - -
Acco07g1398 187 SUPERFAMILY FabD/lysophospholipase-like 38 180 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1398 Acco-ChrAcco07 25975744 25976972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1398 27 181 Miscellaneous Gene Families AT2G26560 53.614 7.21e-50 164