Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1350 ATGTCCTTCAATCAATCAAGCTCCGATAAGAGCGATAGTCAGTACCGTAAATCCGGGCGATCTGGGAGCTTCAATCGGCAGATAGGTTCCTCAGGCGCGTACGTTAAGGGCGGTGGCGGCGGGCCCGCGCCTTCTCCCGCGATCACTTCGGGTGCCTTACAGTCCTCTAATCGGAGTTATAAGAGGTCAAATAATCCACATGGTGAGCAATCTAGGGTAAACCCTCCCCCTGTGAATTCAGCGGAGTCTAATGGTGCTTCTACAGTCCGGACCATACCAAATGGTGCCCATACACAACAATCACCTGGAGCATCTGATGTGCCGTATGCAAATGCAACTGCCAAATCATCTGAACCCTCATCTGTACAGAAGAGCACCAGAGTTGTTCCGAAAGCTCCAACTCCTCGACCTACTGCCGTGAATTCTGATGCAGCAGCTCCTACAACCCCTGCCAAGGTCCCTGAAGATTCATCCAAGCCATTTGCTTTCCAGTTTGGGTCCATTAGTCCCGGGCTCATGAATGGGATTTCAATTCCTGCTCGCACAAGCTCAGCGCCTCCAAATTTGGACGAGCAGAAAAGAGATCAGACTCGTCATGGTTCTTTAAGACCTGTGCCTTCAGTGCCAACACCTCCAAAGCAGCTGCCACCAAGGAATGATGGTGGTGTTACTGGCCAAAGTAATGCTGGGGAGGTTCATTCAGTGAACAAATTGAAAAAGGAGCAGGTGTCATCTTTGCCCCCATCAAGCCAGATGCAAAAGCCATCCGTGACCGGGATATCGATGGCAATGCCATTTCATCACCAATCACAGGCACCTGTACAGTTTAGTGGTCCTAACCCACAGATTCAATCTCAGGGAATGCCAGCAGCATCTCTTCAGATGCCTATGCCTATGCCTTTGCCAATGGGAAATGTTGCACAGGTAGCACAGCAGGTTTTTGTTCATCATGGTCTTCAACCTCTTCCAATCCATCCTCCAGCAATTATGCATCAAGGCCAAAACTTGAGTTTCACTCCTCAAATGGGTCATCAGATGCCCCATCAGTTAGGTAGTGTGGGTATTAACATGAACTCACAGTATACCCAACAGCAAGGTGGAAAATATGCTGGTCCTCGCAAAACCACTACTGTCAGGATTACTCATCCTGAGACACATGAAGAGCTGAGGCTGGACTTTGACAAAAAGGCAGATTCATATACAGAAGGCATGACCTCAGGTGCTAGGTCTTATCCCAATGTTCCTTGTCAGTCTCAACCTGTTCAATCATTTGCTGCTTCGCATCCCCTCAACTATTTTCCATCCAGCACTTACAGTAGTAGCTCTCCTTTTTACCCACCTAGTTCTGTTCCTCTATCAAACAGCCATATAACTTCTAATTCTCAGCAACCAAGATTTAGTTATCCAGTTCCAGTGAATCAGGGCCCTCCAAATGCAGGTCTTAACAATCAACTGTCTATTGGTTCCTTGCCTGTTAATAAAAATGGCGCTTCCATTCCTGGCCTCGGTGAAACACCAAATCTGGAACATTCTCGTGATGTGCAGAAGGTGATGTCATCAGGTACATCTGTAGTAACTCATGCTAGTATCAAACCATATGGTGGCTCTGGAATTGTGGACTCGACAATCACAAATTCTAGCATTTCTGTTGTTAAAACAAGTGAATCTCCCAGCTATTTAGGGTCATCTAATTACATTGGTTCCTCTGTGTCTGATAAAGGCTCTGATAATTTTTTTGAGACCTCTTCACAGCAGTCTAAGTCATCCAGTGATTCTTTTGTTTCAAGGCCAGTGCCAAAACAACCTGCTGTGGGATCTGCTGAGAAGCTTGCTTCTACTCCCTTGATGCCTTCTTCAGCTGCTGTGAGTGAGAACTCTGTCTCGTTTGTGCTCAACAATGAAGGCAGAAGGAAGGAATCTCTTAGCAGGTCAAACTCTTTGAAAGATAATCATAAGAAAACAGGGAAGAGAGGCCAACCGCAGCATCAGGTTCCTGTACATTCTCCTACTGTGGTTAATGTCCCATCTCAAGCTGGAGACAGTGTTATGCTTGATCGTGAAGTTTCTGATACTGTAGAAAACAAAAAAATGGCTTGTGTAGTGATAACCAGTGAAGATAACTCTAGCACACCAGAGGCATTATCAGCCACAGTTAGCAGTGATATAAGTCCTAATGCTAATGAAATGAACACTGGCCCTCCTGCAGAAGGTTCTGTCTGCATTTCATCTGAAGGAGTCGGTGCCTTAACTGTTGATAGTTTGGATAACCATGATCATGATAAACTAGAGGAATCATCACAACAGGATAAGCTTTCAAAGATGAAGATACTTGAGGTAGGTGATAAAAATGACAGATTTTCTGAAGTACTTAAACAAAAAAGTGATGACATTGGAACTAAGTTTAAACAAACAGAACAAGATGCGGCCAAGGAATTGCAAGATGTACTACAAAGATTGGAATTGCAGACCGAATCTACAAATTGTAGATCAGAATGTGACAAGAAGGGTGATAATTTAGATGTGCATACCTCAAATGATTTGGATTCTAGAGAGATCTCTTTAAGTAGAAATGATAGTACAGTTAGCAATGAATCTATTTCTGCAAATTCTGCCACATCTGATAAGAATTCTGGTGATCTCCCAGAAGCCACTTCAAAACATAGCAAGGATTTGCCAGAGAATGTGGACAGTGGCTCAGTGTCCCTTTTAATGTCAGTTAACGAGGATAGATCTATTTTGGAGCCAAATAAGGTGAAAACTACAACAAAAGGAAAGAAGAAAAGAAGGGAGATTCTTCAGAAAGCAGATGCTGCTGGATCAACTTCAGATCTTTATAATGCGTATAAGAGACCTGAGGAAAAGAAAGAAGTAGTTGTAAGTTCAGAGAGCCAAGAAAGTACTTCATCTGGAAGTCTGAAGCAGTTTCCTGATGAGGCTGCTCAATCTGATGCTATGGCAACTGAGAAAGGTGCTTATGATAAAGCCGAGCCTGATAACTGGGAGGATGCTGCTGACATGTCTTCCCCAAAATTGGAAGCTGTGGATAAAAAACAACCGGTTAGCAATGGAAGTGAAGTTACTACTAAAAAATACTCAAGAGATTTCCTTTTGAAATTTGAAGAGCAGTGCATTGATCTTCCTAAGGGTTTTAAAATTAAAGAAGACATTGCTGAGGCTTATTCTAATATTATTGGCTCTCATGTTGAACGTGATTCACATCCTAGTACAGGAAGAATTATGGATAGGTCCAGTGGGATGCCTAGAATGGACCGCCGCGGGTCAGGGCATTTTGAAGAAGACCGTTGGAGTAAAGTCCCTGGACCTTTAAATTCTGCACATGACATGCGTATGGATGGTTTTGGAGGCAATACAGGATTTCGACATGGCCAAGGAGGCAATTTTGGTGTTTTGAGGAACCCACGTGCTCAGACACCTCTGCAATATGCTGGAGGCATTCTTTCTGGACCAATGCATTCAATGGGAAATCAGGGTGTTATGCAGAAGAATATCCCTGATGGTGAGAGGTGGCAACGAGCAACTAACTTCCAGCAGAGGGGTTTAATTCCTTCTCCTCAGACCCCACTACAAATGATGCATAAAGCTGAGAAAAAGTATGAGGTCGGTAAGGTGACAGATGAGGAACAGGCAAAGCAGAGACAGTTGAAAGCCATTTTGAACAAGTTAACTCCTCAGAATTTTGAGAAACTTTTTGACCAGGTAAAAGCTGTTAATATTGACAATACTGTCACCCTTACTGGTGTAATCTCTCAAATATTTGAGAAGGCTCTAATGGAGCCTACCTTCTGTGAAATGTACGCCAATTTCTGCTCACACCTAGCTGCTGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAACAAGGATGATGAGGGTGAGGTCAAACTGTCTGATGAAGAGAGGGAAGCGAAACGAGTTAAGGCAAGAAGACGCATGTTAGGTAATATACGGTTGATTGGAGAGTTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGATCGTATCAGGATCCTGATGAGGAAGACATTGAAGCTTTGTGCAAGCTGATGAGTACCATTGGGGAGATGATTGATCATGCCAAAGCCAAGGAACACATGGATGCATATTTTGAAAGGATGAAATTGTTATCGAACAACATGAATTTATCTTCTCGAGTTAGATTCATGTTGAGGGATTCCATTGATCTTAGAAAGAACAAATGGCAACAGAAGCGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTGCCCAAGAGAGGCATGGCCATGCTGGAAGGCTAGGACGTGGTCCAGGCAATGCATCATCAAGAAGGATGGCTATGGAATTTAGTCCAAGAGGGTCATCTGTGTTATCTCCTCCTAACACTCCTATGGGGACGCGTGGGCTTTCTGCTCAAGGTCGCAGTGGTGGCTCTCAGGATGTTCGTCAAGATGATAGACCATCATATGAGGCTAGAAATTTGTCCGTTCCTTTACCTCAAAGACCTTTAGGTGATGATTCTATAACCTTGGGTCCACAAGGTGGTCTTGCACGAGGAATGTCCTTTAGGGGGCCTGCTGTAATTCCAAGTTCTCCTGCACCTGATGTGCCCCCAGGTGCAGATTCTCGAAGAATGACGTCTGGCCTTAATGGTTGTAGCACTTCGTCAGAGTGTGCTATGTACAGCAGTAGAGAAGATCGGATGCCAAGATATGCTACAGATAGATCTGCTGGTCCATCTTCTCATGACCAATCAGCTATTCAGGAGCGTAATATTAATAATGGCAATAGGGAGTTGAGAAATGCTGACCGGAGTCTTGAGAGACCTTTTGCAACTTCACCTCCTGGAGTGCAAGGATCTGCAGTCTCTGATAATATTCTGTCAGGGAAGGTTTGGCCAGAAGAACGACTGCAGGACAAGTCCATGGCAGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTTGCGCTATGTGTCAAAGATCTAAATTCTCCAAGCTATCATCCTTCGATGATTTCTCTATGGGTCACAGACTCATTTGAGAGAAAGGACACGGAACGAGATCTTTTGGCCAAATTACTAGTGAGCCTTGCAAAGTCTCAGGATGGCCAAAGTACCTTGAGTCAGGCACAGCTTATCCAAGGGTTTGAATCTGTTCTAAGTGGTCTGGAAGATGCCATTAATGATGCCCCTAGAGCCCCAGAATTTCTGGGCCGAATTTTTGCCAAAGTTGTGACGGAAAATGTTGTCTCTTTGAATGATATTGGCCAACTGTTATGTGAAGGTGGGGAGGAACGAGGTCAACTCTTAGAAATTGGACTCGCGGGCGATGTTTTGGGAAGCACCTTCGAGGCCATAAAAACGGAAAAGGGGGATGGTGGTTTGAGTGAGATACGCACAAACTGCAACATGAGGCTGGATACGTTCCGGCCGCCCAATGCTGCGGTATCAAGAAAGTTAGAAACATTTATTTAG 5595 0.4406 MSFNQSSSDKSDSQYRKSGRSGSFNRQIGSSGAYVKGGGGGPAPSPAITSGALQSSNRSYKRSNNPHGEQSRVNPPPVNSAESNGASTVRTIPNGAHTQQSPGASDVPYANATAKSSEPSSVQKSTRVVPKAPTPRPTAVNSDAAAPTTPAKVPEDSSKPFAFQFGSISPGLMNGISIPARTSSAPPNLDEQKRDQTRHGSLRPVPSVPTPPKQLPPRNDGGVTGQSNAGEVHSVNKLKKEQVSSLPPSSQMQKPSVTGISMAMPFHHQSQAPVQFSGPNPQIQSQGMPAASLQMPMPMPLPMGNVAQVAQQVFVHHGLQPLPIHPPAIMHQGQNLSFTPQMGHQMPHQLGSVGINMNSQYTQQQGGKYAGPRKTTTVRITHPETHEELRLDFDKKADSYTEGMTSGARSYPNVPCQSQPVQSFAASHPLNYFPSSTYSSSSPFYPPSSVPLSNSHITSNSQQPRFSYPVPVNQGPPNAGLNNQLSIGSLPVNKNGASIPGLGETPNLEHSRDVQKVMSSGTSVVTHASIKPYGGSGIVDSTITNSSISVVKTSESPSYLGSSNYIGSSVSDKGSDNFFETSSQQSKSSSDSFVSRPVPKQPAVGSAEKLASTPLMPSSAAVSENSVSFVLNNEGRRKESLSRSNSLKDNHKKTGKRGQPQHQVPVHSPTVVNVPSQAGDSVMLDREVSDTVENKKMACVVITSEDNSSTPEALSATVSSDISPNANEMNTGPPAEGSVCISSEGVGALTVDSLDNHDHDKLEESSQQDKLSKMKILEVGDKNDRFSEVLKQKSDDIGTKFKQTEQDAAKELQDVLQRLELQTESTNCRSECDKKGDNLDVHTSNDLDSREISLSRNDSTVSNESISANSATSDKNSGDLPEATSKHSKDLPENVDSGSVSLLMSVNEDRSILEPNKVKTTTKGKKKRREILQKADAAGSTSDLYNAYKRPEEKKEVVVSSESQESTSSGSLKQFPDEAAQSDAMATEKGAYDKAEPDNWEDAADMSSPKLEAVDKKQPVSNGSEVTTKKYSRDFLLKFEEQCIDLPKGFKIKEDIAEAYSNIIGSHVERDSHPSTGRIMDRSSGMPRMDRRGSGHFEEDRWSKVPGPLNSAHDMRMDGFGGNTGFRHGQGGNFGVLRNPRAQTPLQYAGGILSGPMHSMGNQGVMQKNIPDGERWQRATNFQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFDQVKAVNIDNTVTLTGVISQIFEKALMEPTFCEMYANFCSHLAAELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKDDEGEVKLSDEEREAKRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGSYQDPDEEDIEALCKLMSTIGEMIDHAKAKEHMDAYFERMKLLSNNMNLSSRVRFMLRDSIDLRKNKWQQKRKVEGPKKIEEVHRDAAQERHGHAGRLGRGPGNASSRRMAMEFSPRGSSVLSPPNTPMGTRGLSAQGRSGGSQDVRQDDRPSYEARNLSVPLPQRPLGDDSITLGPQGGLARGMSFRGPAVIPSSPAPDVPPGADSRRMTSGLNGCSTSSECAMYSSREDRMPRYATDRSAGPSSHDQSAIQERNINNGNRELRNADRSLERPFATSPPGVQGSAVSDNILSGKVWPEERLQDKSMAAIKEYYSARDVKEVALCVKDLNSPSYHPSMISLWVTDSFERKDTERDLLAKLLVSLAKSQDGQSTLSQAQLIQGFESVLSGLEDAINDAPRAPEFLGRIFAKVVTENVVSLNDIGQLLCEGGEERGQLLEIGLAGDVLGSTFEAIKTEKGDGGLSEIRTNCNMRLDTFRPPNAAVSRKLETFI 1864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1350 1864 MobiDBLite consensus disorder prediction 1440 1638 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 1584 1599 - -
Acco07g1350 1864 Pfam MA3 domain 1676 1789 IPR003891 -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 1440 1470 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 1084 1103 - -
Acco07g1350 1864 SUPERFAMILY ARM repeat 1670 1861 IPR016024 -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 1309 1332 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 854 879 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 827 853 - -
Acco07g1350 1864 FunFam Eukaryotic translation initiation factor 4G 1218 1453 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 176 190 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 576 675 - -
Acco07g1350 1864 Coils Coil 802 829 - -
Acco07g1350 1864 FunFam Eukaryotic translation initiation factor 4G 1668 1863 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 1068 1108 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 576 596 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 961 976 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 612 635 - -
Acco07g1350 1864 Pfam MIF4G domain 1218 1440 IPR003890 GO:0003723|GO:0005515
Acco07g1350 1864 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 352 1863 IPR045208 GO:0003743
Acco07g1350 1864 ProSiteProfiles MI domain profile. 1674 1800 IPR003891 -
Acco07g1350 1864 Coils Coil 1300 1320 - -
Acco07g1350 1864 SUPERFAMILY ARM repeat 1212 1442 IPR016024 -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 989 1005 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 1 233 - -
Acco07g1350 1864 Gene3D - 1668 1864 - -
Acco07g1350 1864 SMART if4_15 1218 1440 IPR003890 GO:0003723|GO:0005515
Acco07g1350 1864 MobiDBLite consensus disorder prediction 1492 1516 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 1615 1633 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 825 1005 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 636 656 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 48 128 - -
Acco07g1350 1864 Gene3D - 1218 1453 - -
Acco07g1350 1864 SMART ma3_7 1675 1791 IPR003891 -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 1 30 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 661 675 - -
Acco07g1350 1864 MobiDBLite consensus disorder prediction 443 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1350 Acco-ChrAcco07 24823902 24831911 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1350 1 1863 Eukaryotic Initiation Factors Gene Family AT3G60240 44.730 0.0 1254