Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1349 ATGTATTGCTTTCACTACTTCACTAGACATACGAGGCGAAGGTCATTAGAACCTGAGCTTAAAGAAGAATTGAAGTCCCAAAACTCTGAGGTCAATAGAATCACCAAATCTTTGTCCGCATCAATCTCACCGCGTGGGATTCCAGAATTGTATCAAGAGAAGGCTCACAATTTGCGTGATTTCTCCTTCGCTGAACTCCAGCGAGCCACGAATAATTTCAGTAGGCTTTTGAAGATTGGTGAAGGTGGGTTTGGGAGTGTCTATAAAGGTTCAATCCAGGCCAATAAAAAGGAGTTTATTTCGGTTGCCATCAAGAGGCTTGACCCTGATGGATTCCAGGGTCATAAGCAATGGTTAGCTGAAGTTCAGTTTCTTGGTGTTGTGGCGCACCCAAATCTTGTGAAACTCATCGGATATTGCGCTGTGGATACTGAAAGAGGGATCCAGAGACTTCTTGTATATGAATACATGCCAAATAAAAGTTTGGAAGATCATCTTTTTAACAAGGCATACGATCCTCTTCCTTGGAAAACAAGACTTGAAATAGCCCTTGGAGCAGGTCGAGGGTTAGCCTATCTCCATGAAGAATTAGAAGTTCAGGTTCATATTAGAGCTATCTTCACAGATAAAGTAACAAAAAAACACAAAAAAGTGAAGTAA 660 0.4121 MYCFHYFTRHTRRRSLEPELKEELKSQNSEVNRITKSLSASISPRGIPELYQEKAHNLRDFSFAELQRATNNFSRLLKIGEGGFGSVYKGSIQANKKEFISVAIKRLDPDGFQGHKQWLAEVQFLGVVAHPNLVKLIGYCAVDTERGIQRLLVYEYMPNKSLEDHLFNKAYDPLPWKTRLEIALGAGRGLAYLHEELEVQVHIRAIFTDKVTKKHKKVK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1349 219 PANTHER OS01G0588500 PROTEIN-RELATED 33 206 - -
Acco07g1349 219 FunFam Serine/threonine-protein kinase BIK1 43 156 - -
Acco07g1349 219 ProSiteProfiles Protein kinase domain profile. 73 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g1349 219 Gene3D Phosphorylase Kinase; domain 1 47 156 - -
Acco07g1349 219 ProSitePatterns Protein kinases ATP-binding region signature. 79 105 IPR017441 GO:0005524
Acco07g1349 219 SMART tyrkin_6 73 219 IPR020635 GO:0004713|GO:0006468
Acco07g1349 219 Gene3D Transferase(Phosphotransferase) domain 1 158 211 - -
Acco07g1349 219 SUPERFAMILY Protein kinase-like (PK-like) 56 196 IPR011009 -
Acco07g1349 219 Pfam Protein tyrosine and serine/threonine kinase 78 196 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1349 Acco-ChrAcco07 24789851 24792618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1349 1 206 Glycoside Hydrolase AT3G07070 41.204 2.66e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco07g1349 PK_Tyr_Ser-Thr 5.7e-19 CL0016