Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1294 ATGGAGTTTAACAAACTCGAAACCCGCAAAACTAACAGTGACCAAGTCGTCATCAACATGGATCTTCAACAGCAGCAACAACAACAACAAAACCAAAACCCGAAACAGGATCATAATTCCTCTCAACCCTATCCTCATCCCAGAAACAGAACACTACAACGCCTCAATTTCTCCAAACCAAAATCACGTTTTGAGGAGATCAACTACCCAATCTCAACACCAAAACCAACTTACAATCCCATCCCAGAGTCCGATTATCACCCACCAGAAAACCGTACTAACTACTCTTCCGACGACGACGACGAATGGTTCGAGAACTTCGACGAGTACGGCTGTGATGACGATGATGAAACCGCCAGAAAGTGCAGAAAGAAGAGGAAGCTAAGGATCAACAAGAGAGCTTTACTTGAATGGTCTTTGTTCCTCATCATCATTACTTGCCTGATATGTTCTCTCACTATCAAATCCCTCAAGCATAAGACTCACTGGGGCCTACAAATCTGGAATTGGTGCTTGTTGGTGATGGTAATCTTCTGTGGCCGACTAGTCTCCGAATGGGTAGTCCGAATCCTCGTGTTCCTCATTGAACGAAACTTCATGTTGAGAGAGAGAGTACTCTACTTCGTGTACGGTCTTCGAAAGAGTTTTCAGAACTGTGTATGGCTGGCCCTAGTTCTAATCGCATGGATGATTATGTTCCACGACGCTCATAATAAAAACAAAGTCCTCAAGAAGTTCTTCAGGGCTCTCGTCGCTATCCTCGTCGGCGCCACCATATGGTTAATAAAAATAGTGCTCGTTAAGGTTCTGGCGTCGTCGTTTCATGTGACGGCTTTCTTTGATAGAATGAAAGAGAGTGTTTTTCATCACTATGTGTTAGAGGCGCTGTCGGGACCGCCATTGGACGAGGAGGAGATGGACCTGCCGAGGCGGCACTTGCAGGAGTCGAGGTCGTTGCCGGCGAGGCTGAGGTACGAGAAGTCTCAGCCGTTGAAGTCGAAGTCGAGGAAGGGAGATGGGTCGAGGAGGATTGATATAGATAAGCTCAAGAGGCTGAGCATGGACGGGAGAGCCACGGCGTGGAGCGTGAAGAAATTGGTGAGCTACGTGATGTCGTCGGGGTTGTCCACGATTTCAAGGACGGTGGACGATTTTGCTGACGCCGAGTCGGAGATTAATAGTGAGTGGCAGGCTAGGACTTGTGCTCAGAGGATATTTAAGAATGTTGCAAAGGAAGGAGCTAAGTACATCGAAGAAGAAGATTTACTGAGATTCTTGAAGGGAGACGAAGTGTACATGATATTTCCTTTATTTGGAGGAGCACTTGAAACTGGAAAAATTACCAAGTCCTCATTCCGAAATTGGGTGGTACAAGCGTACTTTGAGAGAAAAGCATTGGCTCATTCATTGAACGATACGAAAACGGCAGTGCGTCAACTTCACAAACTGGCGAGTGCAATAGTAATAGTTATAATAACAGTGGTGTCTCTCCTGGTGATGGGTTTGGCCACAACTAAAGTCATCTTCGTAGTCACTTCTCAATTGTTGCTCGTAGGTTTTGTGTTCCAAAATATGTGCAAAACTGTCTTTGAATCCATCATCTTTGTCTTCCTCATGCACCCTTTCGATGTCGGAGATCGGTGTGTCATTGATGGCACTCAGATGATTGTAGAAGAGATGAATATATTGACAACAGTGTTCTTAAGATATGACCTCGAGAAAATATATTATCCAAATTCGGTTCTTCTGACGAAACCTATAAGCAATTTCAGAAGAAGCCCAGATATGGCTGACGCCATTGAATTCACTATTGACGCCTCAACCTCCATGGACAATATCACTTCCCTCAAGAAGGCCATTCAAGCGTACATTGAGAGCAAACCCAAGTACTGGAATCCAAAACACGTAGTGATAGTGAAGGAGATAGAGAACATGGACAAGATGAAGATGGCTCTCTGCGTTCAACACACCATTAACCATCAAAACTTCAGCGAGCGGAACGGCCGGCGATCAGAGCTTTTGCTCGAGCTGAAGGAGATCTTTGAGAGCCTCGGCATTAAGTATCGTCTTCTTCCTCAAGAAGTACGTCTCACACATGTTAACATTGGCAACAATAATGGAGCCTTCCCACTTGCATCTTCATAA 2145 0.4517 MEFNKLETRKTNSDQVVINMDLQQQQQQQQNQNPKQDHNSSQPYPHPRNRTLQRLNFSKPKSRFEEINYPISTPKPTYNPIPESDYHPPENRTNYSSDDDDEWFENFDEYGCDDDDETARKCRKKRKLRINKRALLEWSLFLIIITCLICSLTIKSLKHKTHWGLQIWNWCLLVMVIFCGRLVSEWVVRILVFLIERNFMLRERVLYFVYGLRKSFQNCVWLALVLIAWMIMFHDAHNKNKVLKKFFRALVAILVGATIWLIKIVLVKVLASSFHVTAFFDRMKESVFHHYVLEALSGPPLDEEEMDLPRRHLQESRSLPARLRYEKSQPLKSKSRKGDGSRRIDIDKLKRLSMDGRATAWSVKKLVSYVMSSGLSTISRTVDDFADAESEINSEWQARTCAQRIFKNVAKEGAKYIEEEDLLRFLKGDEVYMIFPLFGGALETGKITKSSFRNWVVQAYFERKALAHSLNDTKTAVRQLHKLASAIVIVIITVVSLLVMGLATTKVIFVVTSQLLLVGFVFQNMCKTVFESIIFVFLMHPFDVGDRCVIDGTQMIVEEMNILTTVFLRYDLEKIYYPNSVLLTKPISNFRRSPDMADAIEFTIDASTSMDNITSLKKAIQAYIESKPKYWNPKHVVIVKEIENMDKMKMALCVQHTINHQNFSERNGRRSELLLELKEIFESLGIKYRLLPQEVRLTHVNIGNNNGAFPLASS 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1294 714 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 19 700 IPR016688 -
Acco07g1294 714 MobiDBLite consensus disorder prediction 10 50 - -
Acco07g1294 714 SUPERFAMILY Sm-like ribonucleoproteins 531 590 IPR010920 -
Acco07g1294 714 Pfam Mechanosensitive ion channel 482 687 IPR006685 GO:0016020|GO:0055085
Acco07g1294 714 Gene3D - 541 590 IPR023408 -
Acco07g1294 714 MobiDBLite consensus disorder prediction 1 50 - -
Acco07g1294 714 FunFam Predicted mechanosensitive ion channel 541 590 - -
Acco07g1294 714 MobiDBLite consensus disorder prediction 65 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1294 Acco-ChrAcco07 23382297 23388434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1294 48 701 Mechanosensitive Ion Channel Family AT5G12080 46.429 0.0 601