Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1274 ATGGCCGGCCTTGACTTAGGTTCAGCATCTCACTTTGTTCATCAGCTTCAACAACGCCCTGATCTTCACTCCAATCATGAAGACGACAACAGGCCGGATCGGGACGACGATGACCAGCAAGGGCTTGAGCTAGTTACTTTGAACTCGGGAGGATCTGGCAGTGGAAGTGGCGGTGGCGCCGAGGTCAGTGCTCGCCGACCAAGGGGTCGGCCTCCGGGCTCAAAAAACAAGATGAAACCGCCGGTGATCATCACGAGAGAAAGTGCAAACACCCTTAGGGCTCATATCCTTGAAGTCAGCAGCGGATCCGATGTGTTTGACTCAGTGGCGACCTATGCTAGGAAGGGGCAGCGAGGGATCTGCGTTCTCAGCGGCAGCGGCACCGTCACCAACGTGACCTTGCGGCAGCCAACCGCCGCCGGTGCCGTCGTGACCCTTCCTGGGAGGTTTGAGATACTGTCCCTGGCTGGATCTTTTTTGCCGCCTCCAGCTCCGCCGGGCGCCACCAGCCTGACGATATTTCTCGCCGGAGGGCAAGGTCAAGTTGTGGGAGGAAATGTTGTTGGGGCCTTAATAGCTGCTGGACCTGTTATTGTGATTGCTTCCTCATTTTCAAACGTAGCATATGAGAGATTGCCCTTAGATGAAGAAGAAACCCTACAGATGCAGCAAGGTCAATCTTCCGGCAGTGGTGGCGGTGGCGGTGGCAACTCGTTCCCGGACCCATCTTCAGGGCTTCCGTTCTTCAATCTGCCGTTAAACATGCCACAGTTACCAGTTGATGGTTGGGCCGGAAACTCATCAGGCGGTGGGAGACAACCATATTAG 828 0.5556 MAGLDLGSASHFVHQLQQRPDLHSNHEDDNRPDRDDDDQQGLELVTLNSGGSGSGSGGGAEVSARRPRGRPPGSKNKMKPPVIITRESANTLRAHILEVSSGSDVFDSVATYARKGQRGICVLSGSGTVTNVTLRQPTAAGAVVTLPGRFEILSLAGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIAAGPVIVIASSFSNVAYERLPLDEEETLQMQQGQSSGSGGGGGGNSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSSGGGRQPY 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1274 275 ProSiteProfiles PPC domain profile profile. 89 226 IPR005175 -
Acco07g1274 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 206 IPR005175 -
Acco07g1274 275 CDD DUF296 93 176 IPR005175 -
Acco07g1274 275 MobiDBLite consensus disorder prediction 1 80 - -
Acco07g1274 275 MobiDBLite consensus disorder prediction 219 234 - -
Acco07g1274 275 MobiDBLite consensus disorder prediction 218 252 - -
Acco07g1274 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 231 IPR014476 GO:0003680
Acco07g1274 275 FunFam AT-hook motif nuclear-localized protein 92 219 - -
Acco07g1274 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 222 - -
Acco07g1274 275 Gene3D - 92 227 - -
Acco07g1274 275 MobiDBLite consensus disorder prediction 20 41 - -
Acco07g1274 275 MobiDBLite consensus disorder prediction 42 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1274 Acco-ChrAcco07 22834360 22835187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1274 1 275 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 61.953 3.07e-98 288