Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1256 ATGTGCAGTCGTTCTCTGTTGGAAGTCTCGACAGGTTCCTCTTGGCATCTTGACTCGTTGGCGCTCTCTGGGTCCTCTGCCTTTGTCAGAACCAGCATCGATGCCCTGAGTTCTTCTTCTCTGTCTATGGAAATAAACGTGGATTTCCCTCTTCACTTCAGTCGCTGCTTCGATCTGATTTCTTTCCCTCCTCTTCTCGATTTCTCCCTATCAGCACTTCGGTCGAGCATCTCCTTCGGTCCTTCCCTCTCACTATCGGTCGAGCTTTGCTGTTTATTGGAATATAGTCTTCGGCTCGCTCGTCCATGTCTCTTCCCCTCGTCTCTTTCCCGCGTCCCTGTAACTGTTCAAGGAGGAGGTGCAAAGAGTAGTGGATTGGGAGACGTGTTTGATTCACACACTAATCATCTTTCTCCTACTTATTGCAAGTTCCTCTGTCATTGGGATCGGTTGATTGACTTAGAAGCAAAAGAGACTGAGCTTGCGAAGAAAGAGATGTGGCGATCACATACTTTTAGAAGTCATAGCAGTACCGGCCTTTCCTCTGTCATCCTTGATGCTTCAAATAAGATTCCGTGTCAGAAGTCCCTTAAAGATAATTGTTTCATTTATTGTTTTGTACGATGTGATCCATCTTCTCTATCTGAAATGTCTGATGGTGATCCTTCTAATGCTTCAAGAAATTATTTAGACCTCAAACTAAGAAGTGGAGACTATGTGATATTGAGCACTGACTCTAGCCGTCAAGCTATTGCCAGTGGGGTGATTACAGATATTAGTCATGCCCATGTTTCTGTTTCCTTTTCAAAGCGCTTGCGGATTCCTGGAAGTGGAAGCATCTCCTCTAGCCAAGATCTCTATAAGCAGGTTTGGAGAATTGATAAGCATGAAACTGTGACTTCATTTGCTATTATGAGGTTTAATCTAGTACAACTTTTTCTCCAAAATGCTCAAAGTACTCATCTGAGGAAAATGATTGTTGATCTCAAGGCTCCTAAATTTGACAGTGGATCTATGGTCAGCCAGGACCCAGCAATATCATATGTGTGGTCACAGAAGAGTTTGAATGATGATCAGCGTAGATCAATCCTCAAGATTCTTACGGCAAAGGATTATGCACTCATACTAGGAATGCCCGGAACAGGAAAGACATCGACCATGGTTCATGCTGTGAAAGCATTATTAATCAGAGGCACATCTATTTTGCTGACAGCCTATACAAACTCAGCTGTAGATAATTTACTTATCAAATTAAAAGCTCAGGGAATTGATTTTGTACGTATTGGAAGGCATGAAGCTGTGCATGAGGAGGTTAGAGAACACTGCCTTTCAGCAACGAATGTACAAAATGTTGATGAGATCAAACTAAGGTTAGAGCAAGTTAAAGTAGTTGCAGTTACATGTCTTGGCATCACCAGTCCCTTGCTTGCCAACAGGACTTTTGATGTATGTATTATGGATGAAGCTGGGCAGACAACTCTACCAGTGTCCTTGGGTCCTCTCATGTTTTCCTCAATGTTTGTACTTGTGGGTGATCACTATCAACTTCCTCCACTTGTCCAGAGTGCAGAGGCACGAGAGAATGGTATGGGGATAAGTTTATTTTGTAGGCTCTCAGAAGCACATCCACAAGCAATATCGGCACTACAGAGTCAGTACCGTATGTGTCAGGGCATTATGGACCTGTCAAATGCCTTGATATATGGTGATAGGTTAAGGTGCGGTTCACCTGAGATTGCTAATGCGAAACTTGAGTTTTCTACCTTAAAATGTGGCTTATCTTGGCTAAAAAATGTTTTGAATCCAGGCAGGCCAGTGATATTCATTGATACTGATAAATTGCCAGCTCTAGAGACGAGAGAACAGAAGACTATAAATAACCCAGTTGAAGCTCACATAATAGCTGAGATAGCAATGGCATTGATAAAAAATGGAATTGGAGAAGAACATGTTGGCATTATTACACCCTACAATTCCCAGGCAAATCTCGTACGTCAGGCTGTTTGCATGACCTCGTTGGAAATTCATACCATTGACAAATACCAGGGTAGAGATAAAGATTGTATATTGGTATCTTTTGTGAGGTCTAGCGAAAATCCATCATGCTGTGCTTCTTCTCTGCTAGGAGACTGGCACAGAATAAATGTCGCTCTTACACGTGCCAAGAAAAAGCTGATCATGGTGGGTTCTTGTAGAACACTATCAAAAGTTCCACTACTTAAGCTTCTCATAAAAAAGGTTGAGCAGCAATCAGGTATTGTTAGTGTGTCTAAGAAGGATATCTATCGGAAAGGAGGGCTCAAAAGGTGTTCCCAGATGAGATGA 2325 0.4237 MCSRSLLEVSTGSSWHLDSLALSGSSAFVRTSIDALSSSSLSMEINVDFPLHFSRCFDLISFPPLLDFSLSALRSSISFGPSLSLSVELCCLLEYSLRLARPCLFPSSLSRVPVTVQGGGAKSSGLGDVFDSHTNHLSPTYCKFLCHWDRLIDLEAKETELAKKEMWRSHTFRSHSSTGLSSVILDASNKIPCQKSLKDNCFIYCFVRCDPSSLSEMSDGDPSNASRNYLDLKLRSGDYVILSTDSSRQAIASGVITDISHAHVSVSFSKRLRIPGSGSISSSQDLYKQVWRIDKHETVTSFAIMRFNLVQLFLQNAQSTHLRKMIVDLKAPKFDSGSMVSQDPAISYVWSQKSLNDDQRRSILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRHEAVHEEVREHCLSATNVQNVDEIKLRLEQVKVVAVTCLGITSPLLANRTFDVCIMDEAGQTTLPVSLGPLMFSSMFVLVGDHYQLPPLVQSAEARENGMGISLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLRCGSPEIANAKLEFSTLKCGLSWLKNVLNPGRPVIFIDTDKLPALETREQKTINNPVEAHIIAEIAMALIKNGIGEEHVGIITPYNSQANLVRQAVCMTSLEIHTIDKYQGRDKDCILVSFVRSSENPSCCASSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIKKVEQQSGIVSVSKKDIYRKGGLKRCSQMR 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1256 774 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 297 446 - -
Acco07g1256 774 Pfam AAA domain 532 731 IPR041679 -
Acco07g1256 774 PANTHER DNA2/NAM7 HELICASE FAMILY 284 750 IPR045055 -
Acco07g1256 774 Gene3D - 279 552 IPR027417 -
Acco07g1256 774 Gene3D - 553 765 IPR027417 -
Acco07g1256 774 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 739 IPR027417 -
Acco07g1256 774 CDD SF1_C_Upf1 555 748 IPR047187 -
Acco07g1256 774 Pfam AAA domain 355 445 IPR041677 GO:0004386
Acco07g1256 774 Pfam AAA domain 456 522 IPR041677 GO:0004386
Acco07g1256 774 CDD DEXXQc_DNA2 354 554 IPR026851 GO:0017116
Acco07g1256 774 FunFam DNA replication helicase 553 765 - -
Acco07g1256 774 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 451 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1256 Acco-ChrAcco07 22248318 22258284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1256 118 496 Core DNA Replication Machinery Family AT1G08840 61.979 1.51e-151 468