Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1246 ATGGAAAGAGATAATAATTTATCTACCTCTCCCTCCTCTTCATCTTCTTCTCCATCTTCATCATCAACGTCAACTTCAGCAACTGTTTCAAGTTTGAAATTCAAGTATGATCAGTCTGAACATGGTGATCTGAATGGTAAGCACCAGAAAAGCAAGAAGAAGAGACAGAGAAGTGAGAGTGATGATGATGACAACAATACTGATGAAGGGAATAATAATAATAATGATAAGCATTCTACTTACAGAGGTGTGAGAATGAGAGCTTGGGGAAAATGGGTTTCTGAGATTCGTGAGCCCCGAAAGAAGTCAAGAATTTGGCTCGGAACATATCCAACTGCGGAAATGGCGGCTCGAGCCCATGATGTAGCCGCTTTAACCATCAAAGGTCAATCGGCTTTCCTCAATTTCCCAGAACTGGCTCACCGGCTTCCCCGTCCAGCCAGCTCAGCTCCCAAGGACATCCAGGCCGCGGCTTCAAAGGCAGCGGCAGCCACCACCACCGTGTTCGATAACGTCAAACACTGTCAAGCCGAGGCAGAGGCCAGAGTAGCGGAGCGGAAACAGGCAGAACTGGTCACTTCATCTTCTTCTTCTAGTTTTGTTCCTGAGGATGAAGACGCATTGTTTGACCTACCAGATCTCTTCACTGATGGGGACACTAATGGAGTCTGCTCATATTCTTCTTGGAATTTTTGTGCAGTAGTTGATAGTGGTTTAAGCCTTGATGAACCATTTTTACTATGGGAGAAATATTAA 756 0.4497 MERDNNLSTSPSSSSSSPSSSSTSTSATVSSLKFKYDQSEHGDLNGKHQKSKKKRQRSESDDDDNNTDEGNNNNNDKHSTYRGVRMRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALTIKGQSAFLNFPELAHRLPRPASSAPKDIQAAASKAAAATTTVFDNVKHCQAEAEARVAERKQAELVTSSSSSSFVPEDEDALFDLPDLFTDGDTNGVCSYSSWNFCAVVDSGLSLDEPFLLWEKY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1246 251 Gene3D AP2/ERF domain 80 138 IPR036955 GO:0003700|GO:0006355
Acco07g1246 251 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Acco07g1246 251 PRINTS Ethylene responsive element binding protein signature 103 119 IPR001471 GO:0003700|GO:0006355
Acco07g1246 251 SMART rav1_2 80 143 IPR001471 GO:0003700|GO:0006355
Acco07g1246 251 CDD AP2 79 139 IPR001471 GO:0003700|GO:0006355
Acco07g1246 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 60 217 - -
Acco07g1246 251 SUPERFAMILY DNA-binding domain 79 138 IPR016177 GO:0003677
Acco07g1246 251 MobiDBLite consensus disorder prediction 1 82 - -
Acco07g1246 251 Pfam AP2 domain 81 129 IPR001471 GO:0003700|GO:0006355
Acco07g1246 251 ProSiteProfiles AP2/ERF domain profile. 80 137 IPR001471 GO:0003700|GO:0006355
Acco07g1246 251 FunFam Ethylene-responsive transcription factor 2 79 138 - -
Acco07g1246 251 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1246 Acco-ChrAcco07 21949215 21949970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1246 73 249 AP2-EREBP Transcription Factor Family AT2G44940 52.427 6.75e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco07g1246 AP2 1.4e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g1246 07 21949215 21949970 Acco07g1246 07 21949215 21949970 ECH