Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1204 ATGGCCTTGACCGTCGATCAGCAACAACCAAACTTGAAGCATTTTTGTAAGATCTGCAAGAAAGGTTTCGGGTGTGGGAGAGCGCTCGGTGGACATATGAGAGCGCATGGCATCGGGGACGAGAGCTGGAACCTCGATGATGATGAGGATGCCGCGAGTGATTGGGAAGAAAAGTATGGCGGAGGCGGCGGCGGAAATGAGCCAAAGCGTATATATGCTCTAAGAACCAACCCTAAAAAGAGTTGTAGGCTATGTGAACATGGAAAGTGCACTTCCGATGAACACATGGAGTCGTCGCCAGTTTTTTCCCGGTGGTCGGATGGTGATGACGACGGTGATGGTGAGAGAGGTTGCGGTTGGTCTAAACGGAAGAGATCATTCAGAGCTGGTACGTTCGATTCTACATGTCCTTCAAGTGAAGAAGAAGACATGGCTGCCTACTGTCTCATGATGTTATCAAACTCCAATGTCGGTCATCTTGCCATTACCACAGCTGCCGAGCCGGAGGAATCAAGTGCGTCGGCTTGCAGAGATGAGGAGAGAAGAAATCCCATAAGCTTCATCCCACCAATATCTTATTGTGTTCCTGCCGTAGTGGATCACAAAGCTAAAAGTACGGTGGTTCCGAAGGGCGTGTTTGAATGTAAAGCATGCAAGAAAATCTTCAATTCTCATCAAGCATTAGGTGGCCATAGAGCAAGTCACAAAAAAGTTAAAGGCTGCTTCGCTTCAAGACTCGACAACCTCGAAGATAAGGACGATGATGTCATAACTCATGAAGAGTTTCTTCCCACAAAGTCAAACTCAATGACTCATCAAGATGATCATCAAAACAATGCCACTTTATTAATGGCGTGCTCCTCGTCCAAAAAAAAATCCAAAGTTCATGAATGCTCTATATGTCACAGGACTTTCTCGTCGGGACAAGCCTTAGGAGGACACAAGAGGTGTCATTGGATCACACCAAACACACCAGATTCGTCCACATTGGCTAGGTTTCAGCAATTTCAAGACCACATAGAGCGAATGAATCAGATTCCCAAATTCGATAACTCAGAGCCACTTGATCTAAAGCTCGATCTCAACCTTCCCGCCCCAGCCGATGATCTGGCACGGCGGAACTTGGCAACAGAAATTTTCTTACAGCCATGGTTAGGAGGGACGACGGGTACAAAAGAGAAGGATCAAAGTAGTAATATTAACAATAATAATACTTATAATCAATGTCACAGCCCCAGCCCCAGCCCCAGCAATCGCGAATTACCCGTCGATGAAACTGAAAACGACAAAAACGAAGAAGGCAAAAACAATAACAATCACAGAACTGTGTCGAGGGAAAATGTTGAAGATGAAGCTGATAGTAAAGTGAAGAAGTTAGCGAAACTGAGTGAGCTAAACGACATGAACATGGGACGGAGTTCTTCCCCATGGTTGCAGGTGGGGATTGGTTCAACCACTGGTGTGGGAGCTGAACCATAA 1479 0.4604 MALTVDQQQPNLKHFCKICKKGFGCGRALGGHMRAHGIGDESWNLDDDEDAASDWEEKYGGGGGGNEPKRIYALRTNPKKSCRLCEHGKCTSDEHMESSPVFSRWSDGDDDGDGERGCGWSKRKRSFRAGTFDSTCPSSEEEDMAAYCLMMLSNSNVGHLAITTAAEPEESSASACRDEERRNPISFIPPISYCVPAVVDHKAKSTVVPKGVFECKACKKIFNSHQALGGHRASHKKVKGCFASRLDNLEDKDDDVITHEEFLPTKSNSMTHQDDHQNNATLLMACSSSKKKSKVHECSICHRTFSSGQALGGHKRCHWITPNTPDSSTLARFQQFQDHIERMNQIPKFDNSEPLDLKLDLNLPAPADDLARRNLATEIFLQPWLGGTTGTKEKDQSSNINNNNTYNQCHSPSPSPSNRELPVDETENDKNEEGKNNNNHRTVSRENVEDEADSKVKKLAKLSELNDMNMGRSSSPWLQVGIGSTTGVGAEP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1204 492 SUPERFAMILY beta-beta-alpha zinc fingers 293 319 IPR036236 -
Acco07g1204 492 MobiDBLite consensus disorder prediction 422 462 - -
Acco07g1204 492 MobiDBLite consensus disorder prediction 389 421 - -
Acco07g1204 492 ProSitePatterns Zinc finger C2H2 type domain signature. 16 36 IPR013087 -
Acco07g1204 492 ProSiteProfiles Zinc finger C2H2 type domain profile. 296 318 IPR013087 -
Acco07g1204 492 SMART c2h2final6 213 235 IPR013087 -
Acco07g1204 492 SMART c2h2final6 296 318 IPR013087 -
Acco07g1204 492 SMART c2h2final6 14 36 IPR013087 -
Acco07g1204 492 ProSitePatterns Zinc finger C2H2 type domain signature. 298 318 IPR013087 -
Acco07g1204 492 MobiDBLite consensus disorder prediction 95 117 - -
Acco07g1204 492 ProSiteProfiles Zinc finger C2H2 type domain profile. 213 240 IPR013087 -
Acco07g1204 492 Coils Coil 445 465 - -
Acco07g1204 492 MobiDBLite consensus disorder prediction 467 482 - -
Acco07g1204 492 Pfam C2H2-type zinc finger 14 36 - -
Acco07g1204 492 Pfam C2H2-type zinc finger 295 320 - -
Acco07g1204 492 Pfam C2H2-type zinc finger 212 237 - -
Acco07g1204 492 MobiDBLite consensus disorder prediction 385 492 - -
Acco07g1204 492 PANTHER OS02G0659100 PROTEIN 5 486 - -
Acco07g1204 492 ProSitePatterns Zinc finger C2H2 type domain signature. 215 235 IPR013087 -
Acco07g1204 492 SUPERFAMILY beta-beta-alpha zinc fingers 14 235 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1204 Acco-ChrAcco07 20235071 20236549 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1204 102 363 C2H2 Transcription Factor Family AT1G02040 36.704 1.66e-30 119