Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1159 ATGTTCGGGTTTTACGACCTCGGAGTCACAGACAATGTTCTGCCATTGATGTCCAATAACGTTACTCAATTGCTAAGCAATGCCTTGTCTCTGAACAAGGGCCCATCATCAAACGCTACTACGTCAAATTTCAAAGGTGGGTTCCCGGCCTGGGTTAAGCCGGGTGAACGGAAGCTGTTGCAGGCTTCTTCGCCGGCTTCTCAGGCAAATGTCGTGGTGGCTAAAGACGGTTCGCGGATGTACAAGACCTTGAAGGAGGCCGTAAATGCTGCGACAAAGAGCAACACGGGAAGGTATATCATATATGTGAAGGCAGGAGTCTATAATGAACAAGTTGAGGTAACAAAAAATAATATTTTGTTGGTGGGAGATGGTATTGGAAAAACAATAATCACAGGTAGCAGAAGTGTTGGAGGAGGCACCACAACCTTCAGTTCTGCTACTGTTGCTGCTGTTGGAGATGGATTTATTGCTCGAGACATGACATTTAGAAACACAGCAGGACCGTCGAACCATCAAGCCGTGGCATTCAGATCAGGATCGGATCTCTCAGTGTTCTACCAATTTGACTTCATCTTCGGCAACGCAGCTGTGGTTTTCCAAAACTGCAATCTCTATGCAAGAACACCTCCTCAAAATACCATCACTTACACGGCTCAGGGCCGAACCGACCTAAATCAAAACACGGGCATTATCGTTCACAACTCTAAGGTCACAGGCGCCTCAGACTTTAACTCTAACAACGTTAAGTCTTACCTTGGAAGGCCATGGAAGAAGTATTCAAGAACGGTGTTCATGAAGTGTTCTCTTGATAGTTTGATTGACCCAGCAGGATGGATGCCTTGGAGTGGCAATTTTGCTTTGGACACTTTGTATTACGCTGAGTACGCAAACACAGGATCTGGCTCTTCCACTTCAAATAGGGTTAAGTGGAAGGGTTACCATGTGATTGGTGCTTCTGAGGCCTCTCAGTTCACTGTTGGTAACTTTCTCTCTGGGAATTTTTGGTTACCTGCCACTGGCGTGCCTTTCACTTCTGGTCTTTGA 1047 0.4613 MFGFYDLGVTDNVLPLMSNNVTQLLSNALSLNKGPSSNATTSNFKGGFPAWVKPGERKLLQASSPASQANVVVAKDGSRMYKTLKEAVNAATKSNTGRYIIYVKAGVYNEQVEVTKNNILLVGDGIGKTIITGSRSVGGGTTTFSSATVAAVGDGFIARDMTFRNTAGPSNHQAVAFRSGSDLSVFYQFDFIFGNAAVVFQNCNLYARTPPQNTITYTAQGRTDLNQNTGIIVHNSKVTGASDFNSNNVKSYLGRPWKKYSRTVFMKCSLDSLIDPAGWMPWSGNFALDTLYYAEYANTGSGSSTSNRVKWKGYHVIGASEASQFTVGNFLSGNFWLPATGVPFTSGL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1159 348 ProSitePatterns Pectinesterase signature 1. 95 114 IPR018040 -
Acco07g1159 348 Gene3D - 189 348 IPR012334 -
Acco07g1159 348 Gene3D - 65 188 IPR012334 -
Acco07g1159 348 Pfam Pectinesterase 189 334 IPR000070 GO:0030599|GO:0042545
Acco07g1159 348 Pfam Pectinesterase 70 188 IPR000070 GO:0030599|GO:0042545
Acco07g1159 348 SUPERFAMILY Pectin lyase-like 64 347 IPR011050 -
Acco07g1159 348 PANTHER PECTINESTERASE 189 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1159 Acco-ChrAcco07 18406173 18409369 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1159 3 348 Carbohydrate Esterase AT2G45220 63.298 3.46e-159 454