Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1157 ATGGATGTGGTTCTTCGTTCACTATGTACGTTTCTTCTTCTACTTCTTTTTCCCTTTCTGCTTTCCTCTTATTGTGCCTATGGCTACTCATTGAACGAAGTCAAGTCATGGTGTAGCAAAACCCCTAACCCTAAACCATGCGAGTACTTCTTGGGCTCCAAAACTTACAACAAGCCCATAAAGCAGAAGTCAGATTTCTTCAAGGTTTCAGTTGACCTTGCTCTTGATAGAGCTCGAATGGATCTAAATAAGACTCTCTATCATGGCCCTAAGTGTAGAAACGCACGTGAGAAAGCTGCTTGGGCAGATTGCCTTGAACTCTATGAGCTAACCATAAGCAGGCTCTCAAAAACTGTTCATGCCAAATGCACCAAAGTTGATGCTCAGACTTGGCTCAGCACGGCTTTGACCAACATCGAAACTTGCATGTTCGGTTTTTACGACCTTGGAGTTACAGACTATGTGCCGCCATTGATGTCTAACAACGTTACTCAGTTGCTAAGCAATGCCTTATCTCTTAACAAGGCCCCATCATCAAACGCTGCTATGTCGAGTTCATTTAAAGGTGGCTTTCCGGCCTGGGTTAAGCCCAGTGACCGGAAGCTATTGTATGCTTCTTCTTCGCCGGATTCTCAGGCGAATGTCGTGGTGGCCAAAGACAGTTCAGGGAAGTACAAGACCTTGAAGGAGGCCGTAGATGCTGCGCCAAAGAGTAACACGGGAAGGTATATCATATATGTGAAGGCAGGAGTCTATAATGAACATGTTGAGATAACAGGAAATAATGTTATGTTGGTGGGAGATGGTATAGGAAAAACAATAATCACAGGTTGCAAAAGTGTTGGACGAGGCTCTACAACCTTCCGTTCAGCTACTGTTGCTGCTGTCGGAGATGGATTCATTGCTCGAGATATGACATTTAGAAACACAGCTGGACCATCAAACCACCAAGCCGTGGCATTGAGATCAGGATCGGATCTCTCAGTGTTCTACCGATGCAGCTTTGAGGGATACCAAGACACACTCTACGTTCATTCCGGAAGACAATTATACAGTGATTGCCACATTTATGGCACGGTTGACTTCATCTTCGGTAACGCGGCTGTCATTTTCCAAAACTGCAATCTCCATGCAAGAACGCCTCCTCAAAAGACCATCACATTCACGGCTCAGGGCCGAACCGACCCGAACCAAAACACGGGCATTATTGTTCACAACTCTAAGGTCACAGGCGTCTCGGACTTCAACTATAACAACGTTAAGTCTTACCTTGGAAGGCCATGGAAGAAGTATTCAAGAACGGTGTTCATGAAGTGTTCTCTTGATATTTTGATTGACCCAGCCGGATGGATGCCTTGGAGTGGTAATTTTGCTTTGGAGACATTGTATTACGCTGAGTACGCAAACACAGGATCTGGGTCTTCCACTTCCAATAGGGTTAAGTGGAAGGGTTACCATGTGATTGGTGCTTTTGAGGCCTCTCAGTTCACCGTCGGTAGCTTTCTTTCTGGGAATTCTTGGTTACCTCTCACCGGCGTGCCTTTCATTTCTGGCCTTTGA 1560 0.4558 MDVVLRSLCTFLLLLLFPFLLSSYCAYGYSLNEVKSWCSKTPNPKPCEYFLGSKTYNKPIKQKSDFFKVSVDLALDRARMDLNKTLYHGPKCRNAREKAAWADCLELYELTISRLSKTVHAKCTKVDAQTWLSTALTNIETCMFGFYDLGVTDYVPPLMSNNVTQLLSNALSLNKAPSSNAAMSSSFKGGFPAWVKPSDRKLLYASSSPDSQANVVVAKDSSGKYKTLKEAVDAAPKSNTGRYIIYVKAGVYNEHVEITGNNVMLVGDGIGKTIITGCKSVGRGSTTFRSATVAAVGDGFIARDMTFRNTAGPSNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSGRQLYSDCHIYGTVDFIFGNAAVIFQNCNLHARTPPQKTITFTAQGRTDPNQNTGIIVHNSKVTGVSDFNYNNVKSYLGRPWKKYSRTVFMKCSLDILIDPAGWMPWSGNFALETLYYAEYANTGSGSSTSNRVKWKGYHVIGAFEASQFTVGSFLSGNSWLPLTGVPFISGL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1157 519 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 176 IPR035513 -
Acco07g1157 519 CDD PMEI-like_3 36 179 - -
Acco07g1157 519 SUPERFAMILY Pectin lyase-like 211 518 IPR011050 -
Acco07g1157 519 NCBIfam pectinesterase inhibitor domain 2 175 IPR006501 GO:0004857
Acco07g1157 519 ProSitePatterns Pectinesterase signature 2. 356 365 IPR033131 -
Acco07g1157 519 FunFam Pectinesterase 208 519 - -
Acco07g1157 519 SMART PMEI_2 29 173 IPR006501 GO:0004857
Acco07g1157 519 Pfam Plant invertase/pectin methylesterase inhibitor 33 173 IPR006501 GO:0004857
Acco07g1157 519 Gene3D - 208 519 IPR012334 -
Acco07g1157 519 Pfam Pectinesterase 214 505 IPR000070 GO:0030599|GO:0042545
Acco07g1157 519 ProSitePatterns Pectinesterase signature 1. 239 258 IPR018040 -
Acco07g1157 519 PANTHER PECTINESTERASE 17 509 - -
Acco07g1157 519 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 176 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1157 Acco-ChrAcco07 18301073 18303961 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1157 11 519 Carbohydrate Esterase AT2G45220 63.035 0.0 662