Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1147 ATGCCATACTTTTTACTCTTGCCAATAATCTCTTCTTTCAATTTCATATCTTTTGTGGTTCTCTTCTGTTCTTGCCTCTTTTCCGTTGTTATTGCGACTGATCATCCATCTTACTTTGATAAACATGCGCCTGTACTTGCCACAATTTCCTTCGTAGGTGGATTCGTAATTACAAGCATACTTATCATTATATTTGCAGCTATTATTCGATACAGTAATATATTGTGGCAAGTTTCGATTAGGAAAATAAAACGAAGAAAAACGCAGGGGAAAATAAAGCATGGAGATTTCTCTTCAACAATATGGAATTTTGATGGTCATATTGCATTTGAAGATATCATTAAAGCAACTGACGATTTTGATATCAAATACTACATAGGAGGAGGTGCTTCTGGTGATGTTTACAAGGCAAAACTTCCTGGTGGCAAAATTGTTGCAGTCAAGAAACTTCGCCACATGCTGTCTGAAAATCCGTCGTCGACATTTCATAAAAGTTTCTACAATGAGATCGAGATTTTGACGGAGATTCGTCATCGAAACATCGTTAAGCTCCATGGATATTGCTTAAATATACAGCACATGTTTCTGGTTTATGCATTTATGGAAAATGGTAGCCTCTTACGCGTATTAAGAAATGATGAGAAAGCTCAAGAGTTAACGTGGAGTAAGAGATTCAATATTATTAATGGGATAGCTCAAGCTGTGAAATATATGCATCATGATTGTGTCCCGCCAATTGTTCATAGAGACATCACAAGTAGTAATATCTTGTTGAATTCAGATATGGAAGTATTTGTCTCAGACTTTGGCACAGCTAGGCTCCTTGATCCATATTCATCAAATCAAAGCCTTTTGGTTGGCACTTTTGGCTATGTTGCGCCAGAATTCGCATATACATTAGCAGTGACCGAAAAGTGCGATGTGTATAGCTTTGGAGTAGTTGCATTAGAAACTATGATGGGAAAGCACTCGGGAGAGTTCATTTCATGTTTAACGAAGAAGGATTATTCTAGAGATCAAAAGATAAAGCTCAGAGATATCTTAGACCCAAGACTCCCTCAGCCTCAAACTCGGAAGGATATTTGGGATGTAATTCTTGTGATGACCATTGCATTAGCATGCGTTTGTGCTGAACCAGATTGTAGGCCCTCAATGGAGCAAGTGACTCAGAAACTTTCACTTTCTAGGCCACTTTTTACACTCCCGCTGTTCAATGATATTTCAATTCACCAGTTGGTGAGTCAAGGCATATATATATAA 1260 0.3778 MPYFLLLPIISSFNFISFVVLFCSCLFSVVIATDHPSYFDKHAPVLATISFVGGFVITSILIIIFAAIIRYSNILWQVSIRKIKRRKTQGKIKHGDFSSTIWNFDGHIAFEDIIKATDDFDIKYYIGGGASGDVYKAKLPGGKIVAVKKLRHMLSENPSSTFHKSFYNEIEILTEIRHRNIVKLHGYCLNIQHMFLVYAFMENGSLLRVLRNDEKAQELTWSKRFNIINGIAQAVKYMHHDCVPPIVHRDITSSNILLNSDMEVFVSDFGTARLLDPYSSNQSLLVGTFGYVAPEFAYTLAVTEKCDVYSFGVVALETMMGKHSGEFISCLTKKDYSRDQKIKLRDILDPRLPQPQTRKDIWDVILVMTIALACVCAEPDCRPSMEQVTQKLSLSRPLFTLPLFNDISIHQLVSQGIYI 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1147 419 PANTHER LEUCINE RICH REPEAT KINASE 2 49 394 - -
Acco07g1147 419 ProSitePatterns Tyrosine protein kinases specific active-site signature. 246 258 IPR008266 GO:0004672|GO:0006468
Acco07g1147 419 SUPERFAMILY Protein kinase-like (PK-like) 102 392 IPR011009 -
Acco07g1147 419 FunFam MDIS1-interacting receptor like kinase 2 201 397 - -
Acco07g1147 419 Pfam Protein kinase domain 123 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g1147 419 Gene3D Phosphorylase Kinase; domain 1 78 200 - -
Acco07g1147 419 FunFam Leucine-rich repeat receptor protein kinase MSP1 83 200 - -
Acco07g1147 419 Gene3D Transferase(Phosphotransferase) domain 1 201 397 - -
Acco07g1147 419 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Acco07g1147 419 ProSiteProfiles Protein kinase domain profile. 120 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1147 Acco-ChrAcco07 18066510 18068037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1147 31 294 Receptor kinase-like Gene Family AT4G08850 45.588 1.65e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco07g1147 Pkinase 6.4e-44 CL0016