Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1146 ATGAAATACTGGGATCTTGTGGGCATAGTTCCAAGTCAGGTTGAGGAGAACATTAGCAAGTTTGCCAAGAAGGGTCTCACACCATCTCAAATTGGTGTTATTCTTCGGGATTCTCATGGGCTTGCTCGAAAAATTCTCGAAGATCTGTACCACCTGATTAAGAAAGTTGTTTCAATTAGAAAGCATTTGGAGAGGAATAGAAAGGATAAAGATTCTAAATTTAGGTTGATCTTGGTTGAGAGCAGGATCCTTCGCCTTGCCCGTTACTACAAGAAGACAAAGAAGCTTCCTCCTATTTGGAAATAG 306 0.4052 MKYWDLVGIVPSQVEENISKFAKKGLTPSQIGVILRDSHGLARKILEDLYHLIKKVVSIRKHLERNRKDKDSKFRLILVESRILRLARYYKKTKKLPPIWK 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1146 101 Gene3D - 16 45 - -
Acco07g1146 101 PANTHER RIBOSOMAL PROTEIN S15P/S13E 9 42 IPR023029 -
Acco07g1146 101 SMART Ribosomal_S13_N_2 1 41 IPR012606 GO:0003735|GO:0005840|GO:0006412
Acco07g1146 101 Gene3D - 46 101 - -
Acco07g1146 101 Pfam Ribosomal protein S15 45 95 IPR000589 GO:0003735|GO:0005840|GO:0006412
Acco07g1146 101 CDD Ribosomal_S15p_S13e 44 101 IPR000589 GO:0003735|GO:0005840|GO:0006412
Acco07g1146 101 SMART Ribosomal_S15_2 33 101 IPR000589 GO:0003735|GO:0005840|GO:0006412
Acco07g1146 101 Pfam Ribosomal S13/S15 N-terminal domain 10 40 IPR012606 GO:0003735|GO:0005840|GO:0006412
Acco07g1146 101 SUPERFAMILY S15/NS1 RNA-binding domain 37 100 IPR009068 -
Acco07g1146 101 ProSitePatterns Ribosomal protein S15 signature. 59 89 IPR000589 GO:0003735|GO:0005840|GO:0006412
Acco07g1146 101 FunFam 40S ribosomal protein S13 44 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1146 Acco-ChrAcco07 18046445 18047511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1146 10 101 Cytoplasmic Ribosomal Protein Gene Family AT3G60770 70.536 5.00e-48 148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g1146 07 18046445 18047511 Acco07g1146 07 18046445 18047511 ECH