Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1134 ATGATCAAGCAGGGCAGGAGACAGGAATTATATACCAGACCCACCCAAGACCCTTGTTTGAATACTCACTTGGTTCAGCAACACAATTATGATGCTGCTCCTCATGCAAGCTCGTCAACCTCAAGTTTTAGCCAGTGGAAAATAAGGGATCCCCCTATTGGGAGTGGTGGATTCGAATTTGGTCATGTTGCATCTCACAGAGTAACCGGAGCCTTATCTGCAGTAAAGAAACCAAAAGACCCTGACAATCTTTACAACACCATAGCTCTTATTAAGGGCTTGGAACTGGAACAAGATATCAGCTCCACGGAAGCCACTTCTTTGAACACTGATGAGTTGGTTGATCAACAGAATTATGATGTCGCTCGTTCAGTCTCTTCTACCTCTAACTTTAGCCAATGCAAAATAGGGGATCCTACTGGGGCTACAGAATTTGGAGTTGTTTTTTCTTTGAACACTGACGAGTTGGTTCATCAACAGAATTATGATGTCGCTCGTTCAATCTCTTCTACCTCTAACTTTAACCAATGTAAAACAAGGGATCCTACTGAGGCTACAGAATTTGGAGTTGTTTCTTCTTTGAACACTGATGAGTTGGTTGATCAACAGAATTATGATGTCCCTCATTCAATCTCTTCTACCTCTAACTTTAACCAATGCAAAACAGGGGATCCTACTGGGGCTACAGAATTTGGAGTTGTTCATTCTTTGAATACTGTGTTGGTTCATCAACACAACTGTGATGTTGCTAATTCAGCGTCTTGTACCTCAAATTTAAGTCAATGGGAAATAAGGGATCCCTATATTGGGGTTGGTGGATTTGCATATGTTCATCTTGCCTCTCACAGAGTAACTGGGGACTTGTGTGTAGTAAAGACACTAAAAAACCCTGACAAACCAAGTTCTCTAATCAAGGAAATCCAAATTCTCAGCCAACTTGAACATCCAAATATTGTGAAGTACTATGGCGCTGAAAGAGTTGGAAACCAGATATGGCTATTCATGGAATATGTTGAAACCGGGACACTCACAAAGTACATAAGTGAGTACATAAGTAAATTAGGTGCTTCCCGAGAATGTTTTGTTCGAGATACCACTGCACAAATCCTCTCTGCGTTGGATTACTTACATAACAAAAGAGTAGTCCATAGGGACATCAAGCCCGATAACATACTTGTGGATTCTTACGGCTCTGTAAAGCTTATTGACTTTGGTTTAGCTAAGCATGTAAATGAATCTATGGGCCGTCACTCCAAGTGCGCAACTCCACATTATGCAGCTCCAGAAACTTTTGCACAACAAGGACGATATAGCAGCTTGGATGAGGCACATAGCGCTGATATATGGAGCTTGGCATGTGTAATGATTGAAATGTTCACAGGGCAGCGCCCTTGGCGTGATCTTGATTGGTGGCAGGTCTACCGTGAAGTTTGTATGTACAAGCGAGATCCTGAAATACCAGAAAATTTGTCAACTGAGGGTAAAGAGTTTCTGCAATTATGCCTCGAAAGAAATCCAGCCAAGCGGCCATCAGCTTCAGAATTACTGCAACACTCATTCATGTCTTGA 1569 0.4194 MIKQGRRQELYTRPTQDPCLNTHLVQQHNYDAAPHASSSTSSFSQWKIRDPPIGSGGFEFGHVASHRVTGALSAVKKPKDPDNLYNTIALIKGLELEQDISSTEATSLNTDELVDQQNYDVARSVSSTSNFSQCKIGDPTGATEFGVVFSLNTDELVHQQNYDVARSISSTSNFNQCKTRDPTEATEFGVVSSLNTDELVDQQNYDVPHSISSTSNFNQCKTGDPTGATEFGVVHSLNTVLVHQHNCDVANSASCTSNLSQWEIRDPYIGVGGFAYVHLASHRVTGDLCVVKTLKNPDKPSSLIKEIQILSQLEHPNIVKYYGAERVGNQIWLFMEYVETGTLTKYISEYISKLGASRECFVRDTTAQILSALDYLHNKRVVHRDIKPDNILVDSYGSVKLIDFGLAKHVNESMGRHSKCATPHYAAPETFAQQGRYSSLDEAHSADIWSLACVMIEMFTGQRPWRDLDWWQVYREVCMYKRDPEIPENLSTEGKEFLQLCLERNPAKRPSASELLQHSFMS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1134 522 ProSiteProfiles Protein kinase domain profile. 263 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g1134 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 381 393 IPR008271 GO:0004672|GO:0006468
Acco07g1134 522 SMART serkin_6 262 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g1134 522 FunFam Maternal embryonic leucine zipper kinase 255 522 - -
Acco07g1134 522 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 125 521 - -
Acco07g1134 522 CDD STKc_MAPKKK 261 520 - -
Acco07g1134 522 Pfam Protein kinase domain 268 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco07g1134 522 Gene3D Transferase(Phosphotransferase) domain 1 255 522 - -
Acco07g1134 522 ProSitePatterns Protein kinases ATP-binding region signature. 269 292 IPR017441 GO:0005524
Acco07g1134 522 SUPERFAMILY Protein kinase-like (PK-like) 268 521 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1134 Acco-ChrAcco07 17522084 17526817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1134 260 521 MAP Kinase Kinase Kinase AT5G66850 46.154 7.60e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco07g1134 Pkinase 8.8e-64 CL0016